Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq229830 113 4e-20 seq80618 84.2 2e-11 >seq229830 Length=7395 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||| ||||| || || || |||||||| || || |||||| |||| ||||| Sbjct 5556 AATATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCA 5615 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 |||| || ||| | || ||| |||||| ||||| ||||| | ||| || Sbjct 5616 TCCGATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGAC 5675 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 || ||| | | || | || ||||||||||| |||||| ||| || |||||||| Sbjct 5676 CAGCAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTAC 5735 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||||||||| || || || || |||||| | | || ||||| Sbjct 5736 AACATTCAAAAAGAATCAACCCTTCACTTGGTATTGCGTCTTCGTGGAGG 5785 >seq80618 Length=357 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| ||||| || || || |||||||| |||||||||||| ||||| ||||| Sbjct 123 AATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTGAACCTTC 182 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || || || || ||||||||||| | || ||||| Sbjct 183 CGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA 242 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | | || | || || || ||||| |||||| || || ||| ||||| Sbjct 243 ACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCGACTACAA 302 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| ||||| |||||||| || || || || ||| Sbjct 303 CATCCAAAAGGAATCTACCCTTCACTTGGTGTTG 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401196715408928