Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 448 7e-121
seq55846 102 1e-16
>seq54449
Length=2482
Score = 448 bits (496), Expect = 7e-121
Identities = 655/918 (71%), Gaps = 10/918 (1%)
Strand=Plus/Plus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|||||||||||||||| ||||||||| || ||||||||||| | |||| ||||||||
Sbjct 299 GCGGGTTTTGTACGTAAATAGTACATTCCTGTTTTCAGACCCAATTTCCAAGCGTAGAAA 358
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
||||| |||| ||| ||| |||| || |||| ||||||||| | || ||||||
Sbjct 359 TGCATTGAAGTTAATTTTCCATAGTTTGGTTCTGCTACATGAATATTGAATGACTGACTT 418
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573
||||| || ||||| |||||||| || ||||||| || || ||| ||| |||||
Sbjct 419 TGATCAATAAAAGCACCTCTATCAGCAGCCATTTGAATTGTAGA-TTTAATGGATATTTC 477
Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCT--CGTATT-TTGAATGGA 68630
||||| ||| ||| ||| | | |||||| |||||| || || || ||| || ||
Sbjct 478 CCAAACAGTTTTATAAAGTTCTCTGATATGTGCTGGAATTCTTTCGATTTCTTGTATAGA 537
Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690
|||| | || |||||| || || || ||||| | ||| || | ||| |||||
Sbjct 538 ACCACGTTTTGAAATAATTTCGTTTTTCATATCATCGTCCCATAAATCAAGCTCTGTTAA 597
Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750
| | || | ||| | || || | ||| || || |||||||| |||| ||| | ||
Sbjct 598 GTCCTTGAGCAAATGGTGGTTTACAACTTGGAACTCACCAGATAATACTCGACGGTTATA 657
Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810
|||||| ||||||||||| | |||||||| ||||||| ||||||||||||||| ||
Sbjct 658 AATATTTGAAGTATATGGTTCGAATGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGC 717
Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870
||||||||| ||||| | |||||| |||||| | ||||| | |||||||| ||
Sbjct 718 AGTTGGCATTGGTGCAATCAATAATGAATTTCTTACTCCATGAACCTTTATTTTATCCTT 777
Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930
|||| || ||||||||| | ||||| ||| | ||| | ||| ||||||| ||
Sbjct 778 TAGAGCTTGCCAATCCCACAAATCAGTTGGGGTTTTGTCCCACATATCATATTGTAAGAT 837
Query 68931 TCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTC 68990
||| || || | ||| | |||||||||||||| || || | |||||| |||||
Sbjct 838 TCCTTTGCTAACTGGGCTTCCCTCATATGTTTCATAAGTACCCTCTTTTTCAGCAAGTTC 897
Query 68991 ACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050
||||||||| || | || || ||||||||||| || || || | || ||| || ||
Sbjct 898 ACAACTTGCTTCAAGAGCTCCATAATAAATTGTCTCAAATATTTGCTGATTAAGCAACTG 957
Query 69051 TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110
|| | | ||| ||| | |||||| | | |||||| || ||||| | || || || ||
Sbjct 958 AGCCTTTTCACTTTCGTAAGGATAACGCATAAGAATCAAAGCATCAGAGAAACCTTGTAC 1017
Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTC-AGCTTCTGGAATAGGATAAT 69169
|| || |||||||| || || | ||||| |||||| |||||| || | |||||||
Sbjct 1018 ACCGATCCCGATAGGCCTGTGACGTAAATTTG-ACTTTCTAGCTTCAGGCAATGGATAAT 1076
Query 69170 AATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTT 69229
|||||| |||||| ||||| || | ||||| | || | ||| || || || | ||
Sbjct 1077 AATTAACATCTATTATTTTGTTTAAATTTCTGGTTATAATTTTTGTAACTTCTTTCAATT 1136
Query 69230 TGAGAAAATCAAAT---CGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGAT 69286
| | |||||| || || || | | | | || ||| ||||||| || |||| ||
Sbjct 1137 TTGGGAAATCATATTTACGATCAGCAGTTATATACTGATTAAGTGCTATGGAAGCTAAAT 1196
Query 69287 TACAAACTGCTACCTCAT 69304
||||||| || | ||||
Sbjct 1197 TACAAACGGCGATTTCAT 1214
Score = 403 bits (446), Expect = 2e-107
Identities = 677/969 (70%), Gaps = 13/969 (1%)
Strand=Plus/Plus
Query 69264 ATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTAT 69323
||| ||||||| || |||| ||||||||| || | |||| | | | ||| | ||
Sbjct 1278 ATTAAGTGCTATGGAAGCTAAATTACAAACGGCGATTTCATCTGGAGCAGAATACTCTAC 1337
Query 69324 TATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTT 69383
|| || || || ||||||||||| || || || || | |||||| |||||||||||| |
Sbjct 1338 GATTTCAGTGCAGAGATTACTACACTTAATTGTACCAACATTTTGTTGATTACTCTTTCT 1397
Query 69384 GTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443
||| || || || ||||| | ||| | ||||| |||||||| | || || || |||||
Sbjct 1398 GTTGCAAGCATCTTTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGACTCAATAAT 1457
Query 69444 AGATTTCCAAACGACCCTAGCATTTATTACGGTCTTG-TAACGCTTC--TCTTTTTCATA 69500
| | ||| | ||| |||||| || || | | ||| || ||||||||
Sbjct 1458 TGCATACCAGAGTTGTTGAGCTTTTATT---TTCCTGTTTGCTTTTCCTTCATTTTCATA 1514
Query 69501 TTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATT 69560
| |||| || || ||||| || ||||||||||| | |||||| ||||||| |
Sbjct 1515 CTTAATATAGAGTTTCTCAAATTCTTCACCCCAAACATCGTGCAATCCGGGACATTTGTG 1574
Query 69561 TGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAAT 69620
|||||||| | ||||| | || ||| ||| ||| ||||||||||| | ||| |||||
Sbjct 1575 AGGACACATAAGAGACCAATCTTCGTCAGCCTCAACACGTTTCATAAACAAATCTGGAAT 1634
Query 69621 CCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAA 69679
||| | ||| || ||| |||||||| | || || ||||| |||||||| ||||| || |
Sbjct 1635 CCATAAAGCGTAGAAA-AGATCTCTAGCTCGGTTCTCTTCTTTTCCTGTGTTTTTCTTCA 1693
Query 69680 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCG 69739
||| | ||| || | |||||| |||||||| ||||| | ||| || || | |||| |
Sbjct 1694 AATCCAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATTGCGAATGCTCCAG 1753
Query 69740 GTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCG 69799
| | || || ||||| ||||||| |||| |||| ||||| ||||||| | ||| |
Sbjct 1754 GCCTCTTGTTGCCTCCTTGATCTACATATCGGGCAACATTATTGAAGACTCTTAACATGG 1813
Query 69800 GAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATAT 69859
||| | |||||| || | ||||| ||||||| |||| | ||| | || ||||||
Sbjct 1814 GAACTAAACCATTTGAAGTTCCATTAGTTCCAGCAATAGCTGTCCCTTTAGCCCGAATAC 1873
Query 69860 TACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATG 69919
| | || || ||||| ||||| || || || | |||||| | ||||| |
Sbjct 1874 AGTGTACATTTAATCCGATTCCGCCTGCAGACTTGGAAATCATAGCACATTG-TTCAACG 1932
Query 69920 TGTCAT--ATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACAT 69977
| | | | || || |||||| ||| ||| | ||||||||||| |||||
Sbjct 1933 -GACTTGAAGATCCCTTCTATGGAATCTGAGCACATTGTTAGAAGAAAACATGAAGACAA 1991
Query 69978 TTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTC 70037
|||| | | || | ||| |||||| || ||||| |||||| | || | ||||
Sbjct 1992 TTGAGGCCTTGGTGTGGCAGCAGCAAATAACGTTGGAGAGGCGTGAATAAAATACCTTTC 2051
Query 70038 AGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGC 70097
||| | ||||| ||||| |||||||||| ||||| || ||||||||||| ||
Sbjct 2052 AGATAAAAGATTATATGTCTCAATAGCTGCATCTATGTCGTTTCCATGAATTCCTACAGC 2111
Query 70098 GACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTA 70157
||| | ||| | ||| || ||||||| ||| | |||| |||||| ||||| || ||
Sbjct 2112 GACTCTCATAAGCATGTGTTGAGGTCTTTCAGCAATTTTTCCATTTATCTTCAAAAGATA 2171
Query 70158 TGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
||| |||| |||||||| ||||| || |||||| ||| |||| || ||||| ||
Sbjct 2172 TGAGCGCTCCAATGTTTTAAATCCAAAGTAATTGTATCCAAA-ACTCTATCATAAATGAT 2230
Query 70218 AACAGAATT 70226
| |||||
Sbjct 2231 AGATGAATT 2239
>seq55846
Length=11783
Score = 102 bits (112), Expect = 1e-16
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 34699 AATTCCTAATTCCTTGACCTGTGTTAGAGAACGCCAATCCATATTAGCACTTCCTAGATA 34758
|| ||||| ||| || || ||||||||||| | |||||||||||| |||||||| | ||
Sbjct 10808 AACTCCTAGTTCTTTAACTTGTGTTAGAGACCTCCAATCCATATTCGCACTTCCAATGTA 10867
Query 34759 AATGTGTGCATTATCCGATATCCAAAATTTTGTATGAAGAACACCGCCT 34807
|| |||| |||||| | |||||||| || || |||||||| ||||||
Sbjct 10868 AAAGTGTTGATTATCAGCTATCCAAATCTTAGTGTGAAGAACTCCGCCT 10916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 684924998799240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |