Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 167 3e-36
seq80618 134 2e-26
seq54449 84.2 2e-11
>seq229830
Length=7395
Score = 167 bits (184), Expect = 3e-36
Identities = 174/227 (77%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || ||||||||||| | || |||||| || |
Sbjct 6015 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAGCCATCT 6074
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | |||||||| ||||| ||||| || || ||||||||||| ||
Sbjct 6075 GACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCA- 6133
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || ||||| ||||| ||| | || |||| ||| || || ||||| |||
Sbjct 6134 CAACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAAT 6193
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||||| |||||||| | || | |||||||| || ||
Sbjct 6194 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGAGGAGG 6240
Score = 143 bits (158), Expect = 3e-29
Identities = 137/173 (79%), Gaps = 2/173 (1%)
Strand=Plus/Plus
Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530
||||| ||| | || || || || ||||||||||| || ||||||||||| || |||||
Sbjct 4 CATTGAAAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAACAGCG 63
Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC-CCTAGCAGACTATAATGTCC 27589
||| |||||||| || ||||| ||||| |||| || || | |||| |||||||| | |
Sbjct 64 TCTCATTTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTTAGC-GACTATAACATTC 122
Query 27590 AAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAA 27642
|||| ||||| ||||| || | ||||||||||||||||| ||| | |||||
Sbjct 123 AAAAAGAATCTACTCTCCACTTGGTCTTGCGTCTTCGCGGAGGAGCATTTTAA 175
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | || || || || ||||| | |||||||| ||
Sbjct 5559 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCATCC 5618
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| |||| | || |||||||||||||||||||| ||||| || |||||||||
Sbjct 5619 GATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGACCAG 5678
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| ||| | || || ||||| || ||| | || |||| || || | ||| || || ||
Sbjct 5679 CAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGC-GATTACAA 5737
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| ||||| || ||||| | || ||||||||||| || ||
Sbjct 5738 CATTCAAAAAGAATCAACCCTTCACTTGGTATTGCGTCTTCGTGGAGG 5785
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | || || || || || || | || |||||| | |
Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||||| || || || ||||| || || ||||||||||| ||
Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | || |||||||| || ||| | || || | || || | ||||||||||
Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAAC 5966
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
| ||||| ||||| || || ||| |||| || |||||
Sbjct 5967 ATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCT 6004
>seq80618
Length=357
Score = 134 bits (148), Expect = 2e-26
Identities = 176/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 27390 CAGAAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCT 27449
|||||| | || | |||||| || || |||||||| | || || ||||| ||||| |
Sbjct 110 CAGAAACA--ACCAGAATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTT 167
Query 27450 TGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| ||||| | || | ||||| |||| | ||||| || || || ||||| || ||
Sbjct 168 GGAAGTTGAACCTTCCGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGG 227
Query 27510 AATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC 27569
||| || ||||| || || ||| | || || || || |||||| | || |||| || ||
Sbjct 228 AATCCCACCAGATCAACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCAC 287
Query 27570 CCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629
| | | ||||| || ||||||||||||| || ||||| | || |||||||| || ||
Sbjct 288 CTTGTCCGACTACAACATCCAAAAGGAATCTACCCTTCACTTGGTGTTGCGTCTCCGTGG 347
Query 27630 TGG 27632
|||
Sbjct 348 TGG 350
>seq54449
Length=2482
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966
||| || | ||| || ||||| | || || | | | | | |||| |||||||| |||||
Sbjct 1290 GGAAGCTAAATTACAAACGGCGATTTCATCTGGAGCAGAATACTCTACGATTTCAGTGCA 1349
Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026
| |||| | ||||||||||||| | |||| || || ||| ||||||||| ||
Sbjct 1350 GAGATTACTACACTTAATTGTACCAACATTTTGTTGATTACTCTTTCTGTTGCAAGCATC 1409
Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||||| |||| || || || || || || || |||||||
Sbjct 1410 TTTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGACT 1450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568663336435920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |