Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq194783 127 2e-24
seq188621 118 9e-22
seq7579 111 1e-19
>seq194783
Length=813
Score = 127 bits (140), Expect = 2e-24
Identities = 446/686 (65%), Gaps = 18/686 (3%)
Strand=Plus/Plus
Query 118375 AAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGGA 118434
||||||||||| ||||| || || || || | || | | | ||||| |||| | ||
Sbjct 20 AAATCTTCAAAATTAAATTCATCAATTTTCTCGACTTTCCTATTTATAACTAGTTTTGGG 79
Query 118435 AACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACA 118494
|| || || | ||||| | || | || ||| | ||||||| | || ||
Sbjct 80 AAAGGTCTTGGAACTCTTGTCAACTGCTCTGCCAATGGAATCACGTGATTCTTGTAAACG 139
Query 118495 TGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGT--AAGCCCTGTCAGGTGAGCAA 118552
|||| ||| ||||| |||| | || |||||| | | || | | || |||||||
Sbjct 140 TGAGTATCTCCAATGTTATGGACAAAATCACCAACTCTTAAATTACAGACA--TGAGCAA 197
Query 118553 TCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTG 118612
|||| | || |||||| |||||||| | ||| || ||||| || | | |||| |||
Sbjct 198 TCATATGAGTTAACAAAGCATAGCTGGCAATATTGAATGGAACTCCTAAAGCCATATCTC 257
Query 118613 CTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGA 118672
| | ||| |||||||| ||||| ||||| || ||| |||||||||||| |
Sbjct 258 CAGCTCTTTGGTACAAAGAACAAGAAAGCTCTCCATTTTGAACATAAAACTGTACAAAAC 317
Query 118673 TGTGACATGGAGGCAGAACCA----TGGAACTCAGTTGGGCAGGATTCCAGGCTGTTAAA 118728
| |||||||| || || ||| |||| | | |||||||||| ||||| |
Sbjct 318 TATGACATGGTGGGAGGGCCATTTTTGGA----ATGTCCACAGGATTCCAAGCTGTCATG 373
Query 118729 ACATGCCTTCTGCTATATGGTTCTACCTGTATACCCTCAATTAAATT-CTGAATCTGATC 118787
| ||||||| || ||| | | || | |||| ||| || || ||| ||
Sbjct 374 CAAATCCTTCTGTCATTTGGATTGGTTTTAATTGTGTGGATTACATTGCTCAA-CTGGTC 432
Query 118788 CACACCCTTTCCAGTATACTGAGACTCGCATCCTTTATATTCTGCCCCAAAAAATCTCCA 118847
|| || ||||||||||| | | || ||| ||||| ||||| ||| | |||
Sbjct 433 AACGCCTTTTCCAGTATAATCGTCGTGACAAGTTTTGTATTCAGCCCCGAAATGACGCCA 492
Query 118848 TTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGACCTAAAATCTAAACCTACTTTTCT 118907
|||||| ||||| || || |||| ||||| | || | ||| | || ||| |
Sbjct 493 TTGAAAGCCATATACTGGTCCCAAGTCTCCTTCTTCTCT-GTCTGTAAGACCACATTTAT 551
Query 118908 CTGA-AATTCTTTTGACCCATTAGCATTCCAAATAGCAA-CTCCtttttttGCCAGATCA 118965
|| | || ||| ||| | ||| ||||||| || || | ||| | ||| || |
Sbjct 552 CTAAGAAATCTCTTGTGCAATTGTCATTCCAGATCTTAATGTTCTTGTCTTG-AAGTACC 610
Query 118966 TTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAA 119025
||| || || ||| || | |||||| | || || ||||| || | ||||| ||
Sbjct 611 TTAACATTAGTTTGACCTCTCACAAACCACAACAGTTCTTCAACTACAGCCCTCCAGAAG 670
Query 119026 ACTGTTTTTGTTGTAAACAGTGGAAA 119051
||| ||||||| || |||| |||||
Sbjct 671 ACTCTTTTTGTGGTCAACAAAGGAAA 696
>seq188621
Length=750
Score = 118 bits (130), Expect = 9e-22
Identities = 380/578 (66%), Gaps = 10/578 (2%)
Strand=Plus/Minus
Query 118479 GTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGT-AAGCC 118537
||||||| | || || |||| ||| ||||| |||| | || |||||| | | |||
Sbjct 665 GTGATTCTTGTAAACGTGAGTATCTCCAATGTTATGGACAAAATCACCAACTCTTAAGTT 606
Query 118538 -CTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACA 118596
| | || ||||||||||| | || |||||| |||||||| | ||| || |||||
Sbjct 605 ACAGACA--TGAGCAATCATATGAGTTAACAAAACATAGCTGGCAATATTGAATGGAACT 548
Query 118597 CCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACA 118656
|||| |||||| || | | ||| |||||||| ||||| || || || ||| ||||
Sbjct 547 CCCAAACCCATATCACCAGCTCTTTGGTACAAAGAACAAGAAAGTTCTCCATTTTGAACA 488
Query 118657 TAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCAGGATTC 118716
|||||||| | | |||||||| || || |||| | | | ||||||||
Sbjct 487 TAAAACTGTACAAAACTATGACATGGTGGAAGGGCCATTTTAGGGATGTCCACAGGATTC 428
Query 118717 CAGGCTGTTAAAACATGCCTTCTGCTATATGGTTCTACCTGTATACCCTCAATTAAAT-T 118775
|| ||||| | | ||||||| || ||| | | || | |||| ||
Sbjct 427 CAAGCTGTCATGCAAATCCTTCTGTCATTTGGATTGGTTTTAATTGTGTGGATTACATGG 368
Query 118776 CTGAATCTGATCCACACCCTTTCCAGTATACTGAGACTCGCATCCTTTATATTCTGCCCC 118835
|| || ||| || || || || |||||||| | | | || ||| ||||| |||||
Sbjct 367 CTTAA-CTGGTCAACGCCTTTGCCAGTATAATCATCATGACAAGTTTTGTATTCAGCCCC 309
Query 118836 AAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGACCTAAAATCTAA 118895
|||| | ||||||||| ||||| || || |||| ||||| | || | | |||
Sbjct 308 AAAATGACGCCATTGAAAGCCATATACTGGTCCCAAGTCTCCTTCTTCTCT-ATCTGTAA 250
Query 118896 ACCTACTTTTCTCTGA-AATTCTTTTGACCCATTAGCATTCCAAATAGCAA-CTCCtttt 118953
| || ||| ||| | || ||| ||| | |||| ||||||| || || | ||| |
Sbjct 249 GACCACATTTATCTAAGAAATCTCTTGTGCAATTATCATTCCAGATCTTAATGTTCTTGT 190
Query 118954 tttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACG 119013
||| || | || || || ||| || | |||||| | || || ||||| ||
Sbjct 189 CTTG-AAGTACCTTCACATTGGTTTGACCTCTCACAAACCACAACAGTTCTTCAACTACA 131
Query 119014 CCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA 119051
| ||||| || ||| |||| || || | || |||||
Sbjct 130 GCCCTCCAGAAGACTCTTTTAGTGGTCAGCAAAGGAAA 93
>seq7579
Length=34747
Score = 111 bits (122), Expect = 1e-19
Identities = 485/752 (64%), Gaps = 19/752 (3%)
Strand=Plus/Minus
Query 118375 AAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAG-TGTGGG 118433
||||||||||| || ||||| || || || | || | ||| ||| || | ||||
Sbjct 14531 AAATCTTCAAATTTGAAGTCCTCGATTTTCTCGACTTTACGGTTAATGATCAGCTTTGGG 14472
Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493
||| || || | ||| | || || ||||| || |||| |||||| |||||||
Sbjct 14471 AAA-GGTCTTGGAACTCTTTTAAGCTGTTCTTTCAAAGGATCAACATGATTCTTATAGAC 14413
Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAAT 118553
||||| ||||||| | || | || || ||| | | || || || ||||||||
Sbjct 14412 ATGAGTGTCCCCAAAACTGTGAACAAAGTCTCCAACTTTGAGACCACAGAGATGAGCAAT 14353
Query 118554 CATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGC 118613
||| || ||||| ||| ||| || || | ||| ||||| || || || || | || ||
Sbjct 14352 CATATAAGTCAATAAAGCGTAACTTGCAATATTGAAAGG-ACTCCGAGCCCAACATCAGC 14294
Query 118614 TGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTTATGAT 118673
|| || ||||||| || || | ||| | | | ||||||||| ||| |
Sbjct 14293 AGACCTTTGGTACATCAAACATGATAACTCATCATCTTGAACATAAAATTGAGCAAAACA 14234
Query 118674 GTGACATGGAGGCAGAACCA----TGGAACTCAGTTGGGCAGGATTCCAGGCTGTTA-AA 118728
||||| || || | ||| |||| || | | || ||||| |||| | |
Sbjct 14233 ATGACAAGGTGGTAATGCCATTTTTGGA----AGATCCACTGGGTTCCAAGCTGACATAC 14178
Query 118729 ACATGCCTTCTG-CTATATGGTTCTACCTGTATACCCTCAATTAAATTCTGAATCTGATC 118787
| || ||||||| | || | || | | || || | | ||| | || | | |||||
Sbjct 14177 AGAT-CCTTCTGTCCGTAGGATTATTCTTG-ATTCTTTGAATGACATCATTCAATTGATC 14120
Query 118788 CACACCCTTTCCAGTATACTGAGACTCGCATCCTTTATATTCTGCCCCAAAAAATCTCCA 118847
|| || | | ||| | | || ||||||||||||||||||| | |||
Sbjct 14119 AACTCCTTGGTTTGAATAGTCGTCATGACAAGTTTTATATTCTGCCCCAAAATGACGCCA 14060
Query 118848 TTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGACCTAAAATCTAAACCTACTTTTCT 118907
||| || ||||| || ||||||| ||| || | |||| | |||| | || ||| |
Sbjct 14059 TTGGAATCCATAGACTGGCCCCAAATCCCCTTCTTCCCTATCA-GTAAAACCACATTTAT 14001
Query 118908 CTGA-AATTCTTTTGACCCATTAGCATTCCA-AATAGCAACTCCtttttttGCCAGATCA 118965
| | ||||| | | | || ||| ||| | | || | |||| ||| | ||
Sbjct 14000 CCAAGAATTCCCTGGTGCTGTTTCCATCCCATATTTTCACGTTTTTTTCTTGTAAAAT-T 13942
Query 118966 TTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCCAAAAA 119025
|| | || || ||| | | ||||||||||| || || |||| |||||||| ||
Sbjct 13941 TTGGCATTAGTTTGACCTTTGATGAACCAAAGAAGTTCTTCTGCAACACCTCTCCAGAAT 13882
Query 119026 ACTGTTTTTGTTGTAAACAGTGGAAACTGACCTCTAAGTGAATATCTTGTTTGTGTTCCA 119085
|| ||||||| || || | |||||||||| |||| || | | || |||| |||
Sbjct 13881 ACCCTTTTTGTAGTTAATAATGGAAACTGATCTCTGAGATTAAACCTCATTTGACAACCA 13822
Query 119086 AAAATAGACAGAGTCCCAACACCTGTTCTATC 119117
|| ||||||| ||| ||||| || || | |||
Sbjct 13821 AAGATAGACAAAGTGCCAACTCCGGTACGATC 13790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413309711175124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |