Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq160753 158 3e-33
seq80618 140 7e-28
seq229830 136 9e-27
>seq160753
Length=592
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||||||||| ||||| ||||||||||||||||| | | ||
Sbjct 370 ACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGT 429
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||||| || ||||| |||||||| | ||||| || || ||||| | |||
Sbjct 430 GCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCC 489
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||| || ||||||||||| || |||||||| || |||||||| |||||| || ||
Sbjct 490 TTCTTTATCCTGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAG 549
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || || | || || || || | ||||||
Sbjct 550 GGTGATAGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| || ||||| ||||| ||||||||||| | | || | ||||||||||| ||||
Sbjct 161 TGAAGGGTTGACTCCTTTTGAATGTTATAATCTGACAATGTGCGTCCATCTTCCAACTGC 220
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || |||||||| | |||||||| || ||||| | |||||||| || || |||||
Sbjct 221 TTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCTTGAATCTTA 280
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| || |||||||| || ||||| || || ||||| || ||||| ||
Sbjct 281 GCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGTGATAGTTTTTCCAGTC 340
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| ||| || || || | ||||||
Sbjct 341 AAAGTTTTGACGAAAATCTGCAT 363
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 210980 GAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCAC 211039
|||||| | |||||||| || ||||| | |||||||| ||||| ||||| || ||
Sbjct 1 GAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCCTGAATCTTAGCCTTAAC 60
Query 211040 GTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTT 211099
||| ||||||||||| || |||||| || | |||||| ||||| || || | || ||
Sbjct 61 GTTCTCGATGGTGTCTGATGGTTCAACTTCTAAAGTGATGGTCTTACCAGTCAAGGTTTT 120
Query 211100 TACAAACACCTGCAT 211114
|| || | |||||
Sbjct 121 GACGAAGATTTGCAT 135
>seq80618
Length=357
Score = 140 bits (154), Expect = 7e-28
Identities = 154/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| || || || ||||||||||| || || | | ||| | ||||||||||| ||
Sbjct 327 GTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCATCTTCCAATTG 268
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | |||||||| || || || | |||||| ||||| ||||||||
Sbjct 267 CTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTT 208
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || ||||| |||||||| || |||||| || | || || ||||| || ||
Sbjct 207 GGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTAATGGTCTTACCAGT 148
Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115
| |||||| || || | |||||||
Sbjct 147 CAAAGTCTTGACGAAAATCTGCATT 123
>seq229830
Length=7395
Score = 136 bits (150), Expect = 9e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAA 210948
|| |||||| | | || | |||||| || || |||||||| ||||| ||||| | |||
Sbjct 5783 TCCACGAAGACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAA 5724
Query 210949 GGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008
| | | ||||||||||| || ||||| |||||||| | ||||| ||||| || || |
Sbjct 5723 AG-TGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGA 5665
Query 211009 CTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068
||||||||||||||| || || ||| || ||||| || || || || ||||||||
Sbjct 5664 TTCCTTCCTTGTCCTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCT 5605
Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
| | || || || || || || | |||||| || || | |||||| ||
Sbjct 5604 CCAAGGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCATATT 5556
Score = 129 bits (142), Expect = 1e-24
Identities = 124/159 (78%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | | ||| | ||| ||||| || |||||||| |||||||| || ||| ||
Sbjct 159 CGAAGACGCAAGACCAAGTGGAGAGTAGATTCTTTTTGAATGTTATAGTCGCTAAGAGTG 100
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||||| |||||||| || || || || || || ||||| || ||||||| |||
Sbjct 99 CGGCCATCTTCGAGCTGCTTTCCGGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCT 40
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052
||||||||||||||||| ||| |||||||| ||||||
Sbjct 39 TCCTTGTCCTGGATCTTGGCTTTGACGTTTTCAATGGTG 1
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||||||||| ||||| ||||||||||||||||| | | || | |||||||
Sbjct 7388 AGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGACAATGTGCGTCCATCT 7329
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008
|||| || ||||| ||||| || | |||||||| || |||||||
Sbjct 7328 TCCAATTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAA 7283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1155720663397965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |