Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 158 8e-34
seq160753 129 4e-25
seq80618 109 4e-19
>seq229830
Length=7395
Score = 158 bits (174), Expect = 8e-34
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| |||||| | || |||||||| ||||| | |||||||| | |
Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | || || || |||||||||||| | || |||||||||
Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||||| || ||||| ||||||||| ||||||||| |||||| || || || |||
Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAAC 5966
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| |||||||| || ||| | |||||||| ||| | | |||||||
Sbjct 5967 ATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGG 6013
Score = 134 bits (148), Expect = 9e-27
Identities = 152/201 (76%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || || | || || ||||| || || | || ||||| |
Sbjct 5556 AATATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCA 5615
Query 23668 ACGGACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || ||| ||| |||| ||||| | |||||| ||||| ||||| | || |||||
Sbjct 5616 TCCGATACTATTGAAAATGTTAAAGC-TAAAATTCAGGACAAGGAAGGAATCCCCCCAGA 5674
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| || ||||| || || || ||||||||| ||||||| | ||||||||| |||||||
Sbjct 5675 CCAGCAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTA 5734
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| |||||||| || ||
Sbjct 5735 CAACATTCAAAAAGAATCAAC 5755
Score = 118 bits (130), Expect = 7e-22
Identities = 163/227 (72%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || | || ||||| || || || | |||||||| | |
Sbjct 6015 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAGCCATCT 6074
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | || || ||| |||||||||||| | || ||||||| |
Sbjct 6075 GACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATC-A 6133
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || |||||||| |||||| ||||||| | ||||||||| |||| |||||
Sbjct 6134 CAACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAAT 6193
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| ||||| || || || | || || ||| | | | ||||||||
Sbjct 6194 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGAGGAGG 6240
Score = 87.8 bits (96), Expect = 1e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| ||||| | || ||||||||||||||| | || |||||||| || || || |||
Sbjct 32 GACAAGGAAGGCATTCCTCCAGATCAACAGCGTCTCATTTTTGCCGGAAAGCAGCTCGAA 91
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
|| | |||||| | |||| || ||||| |||||||| || || | || || || ||
Sbjct 92 GATGGCCGCACTCTTAGCGACTATAACATTCAAAAAGAATCTACTCTCCACTTGGTCTTG 151
Query 23824 AGGTTGCGAGGAGGATCA 23841
| | || |||||| ||
Sbjct 152 CGTCTTCGCGGAGGAGCA 169
Score = 82.4 bits (90), Expect = 5e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 23713 GGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGC 23772
||| | || ||||||||||| ||||| || || || ||||||||| ||||||| | ||||
Sbjct 7279 GGTATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGCAAACAATTGGAAGATGGACGC 7338
Query 23773 ACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| || ||||| ||||| ||||| ||||| || | || || |||
Sbjct 7339 ACATTGTCAGATTATAACATCCAAAAGGAGTCAACTCTTCACTTGGTT 7386
>seq160753
Length=592
Score = 129 bits (142), Expect = 4e-25
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| ||||| | || |||||||| ||||| || |||||||| | |
Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAGCCATCA 304
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| || |||| | || | || || || |||||| | || ||||||||
Sbjct 303 GACACCATTGAGAACGTTAAGGCTAAGA-TTCAAGATAAGGAAGGTATCCCTCCAGATCA 245
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||||| || || ||||| || || ||||||| | |||||| || ||||| ||
Sbjct 244 ACAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGCACATTGTCAGATTATAA 185
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
||| ||||| ||||| || | ||||| || ||
Sbjct 184 CATTCAAAAGGAGTCAACCCTTCATTTGGTATT 152
>seq80618
Length=357
Score = 109 bits (120), Expect = 4e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| || || | || || || || || || | |||||||| | |
Sbjct 123 AATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTGAACCTTC 182
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||||| | || || || ||||||||||| | || ||||||||
Sbjct 183 CGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA 242
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||||| || || ||||| || ||| ||||||| | |||||| || ||| |||||
Sbjct 243 ACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCGACTACAA 302
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| || || ||
Sbjct 303 CATCCAAAAGGAATCTAC 320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337057828448828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |