Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq80618 145 2e-29
seq11493 145 2e-29
seq229830 138 3e-27
seq160753 123 6e-23
>seq80618
Length=357
Score = 145 bits (160), Expect = 2e-29
Identities = 166/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || | ||| || || ||||| ||||||| ||||| |||| ||| ||
Sbjct 345 ACGGAGACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGT 286
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | ||||| || |||||||| | |||||||| || || || || ||
Sbjct 285 GCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCC 226
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| |||||||||||||| ||| ||| ||| |||||||| || | ||| || || ||
Sbjct 225 TTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAA 166
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || ||||| || |||||||| || | ||| | ||||||
Sbjct 165 GGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATT 123
>seq11493
Length=9723
Score = 145 bits (160), Expect = 2e-29
Identities = 140/180 (78%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 7542 TGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTT 7601
|||| || |||| |||| || || ||| |||| || ||||| ||| |||| ||||| ||
Sbjct 999 TGGTGATGACCAAATTTATAATGTAATTGTTACTGCCCATGCATTTATTATAATTTTTTT 1058
Query 7602 TTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGG 7661
| | || || || |||| ||||| || || ||||||||||| || || ||||| | ||
Sbjct 1059 TATAGTAATACCTATTATAATAGGAGGATTTGGAAATTGATTAGTCCCCTTAATATTAGG 1118
Query 7662 TGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721
|| |||||||||||||||||| | | || ||||||||||||||| |||| || |||||
Sbjct 1119 GGCACCTGATATGGCTTTTCCACGAATAAATAATATAAGTTTTTGAATACTTCCCCCTTC 1178
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| || ||||||||||| |||| ||||||||| || || ||||| || || || |
Sbjct 1620 TTCAGGGTGTCCAAAAAATCAAAATAGATGTTGATATAGAATTGGATCTCCCCCTCCCGC 1561
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
|||||||| || ||||||||||||| || |||||
Sbjct 1560 AGGATCAAAGAATGATGTATTAAAATTTCGGTCTGTTAA 1522
>seq229830
Length=7395
Score = 138 bits (152), Expect = 3e-27
Identities = 164/221 (74%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || || | ||| ||||| ||||| ||||||| |||||| ||| |||||
Sbjct 6234 CGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTTAAAGTG 6175
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| | || || || || ||||| || |||||| | || || |||||||||
Sbjct 6174 CGACCATCTTCCAATTGTTTACCGGCAAAGATGAGACGTTGT-GATCTGGAGGAATACCT 6116
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| |||||||| ||||| ||| || ||| || ||||| || | || || |||||
Sbjct 6115 TCTTTGTCTTGAATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAACTTCTAAG 6056
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || |||||||| || | ||| | ||||||
Sbjct 6055 GTAATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 6015
Score = 131 bits (144), Expect = 4e-25
Identities = 166/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || || ||||||||||| | ||||||||| ||||||
Sbjct 5780 ACGAAGACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGT 5721
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | || || ||||||||||| | ||||| ||||| || || || ||
Sbjct 5720 GCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCC 5661
Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
||||||||| || || ||| || || ||| ||| || || || || | ||| || || |
Sbjct 5660 TTCCTTGTCCTGAAT-TTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCA 5602
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| || || || || || |||||||| || | ||| | ||||| ||
Sbjct 5601 AGGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCATATT 5556
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
||||| || ||||||||||| | || || || | ||| || | || ||||| | ||
Sbjct 5989 TGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGTCCGTCTTCCAATTGT 5930
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||| ||||| | |||||||| || || ||||||||||| ||||||||||||||
Sbjct 5929 TTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTG 5870
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
||| || ||| || ||||| || | || || || || ||||| || || || |||
Sbjct 5869 GCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAACTTCCAATGTGATGGTTTTTCCAGTC 5810
Query 225691 AAAGTTTTTATGAACACTTGCAT 225713
|| ||||| | ||| | ||||||
Sbjct 5809 AAGGTTTTGACGAAAATTTGCAT 5787
Score = 107 bits (118), Expect = 5e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || ||| | ||||||||| ||||||||||| | || || ||| | |||
Sbjct 159 CGAAGACGCAAGACCAAGTGGAGAGTAGATTCTTTTTGAATGTTATAGTCGCTAAGAGTG 100
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| |||||||| || || || || || || ||||| || || ||||| |||
Sbjct 99 CGGCCATCTTCGAGCTGCTTTCCGGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCT 40
Query 225613 TCCTTGTCTTGGATCTT 225629
|||||||| ||||||||
Sbjct 39 TCCTTGTCCTGGATCTT 23
>seq160753
Length=592
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || || || || ||||| | || ||||| | ||| || | |||||||| | ||||
Sbjct 161 TGAAGGGTTGACTCCTTTTGAATGTTATAATCTGACAATGTGCGTCCATCTTCCAACTGC 220
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || |||||||| | |||||||| || || || ||||||||||| ||||| |||||
Sbjct 221 TTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCTTGAATCTTA 280
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
||| || || ||||||||||| | || || || | ||||| || || || |||
Sbjct 281 GCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGTGATAGTTTTTCCAGTC 340
Query 225691 AAAGTTTTTATGAACACTTGCAT 225713
|||||||| | ||| | |||||
Sbjct 341 AAAGTTTTGACGAAAATCTGCAT 363
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| ||||| || || ||||||| || ||||| | || ||
Sbjct 370 ACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGT 429
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | || || ||||||||||| | ||||| || || || || || ||
Sbjct 430 GCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCC 489
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| || || |||||||| ||| || ||| || ||||| || | ||| || || |
Sbjct 490 TTCTTTATCCTGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAG 549
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| ||||| ||||| | ||| | |||||
Sbjct 550 GGTGATAGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591
Score = 104 bits (114), Expect = 6e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 225579 GAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCAC 225638
|||||| | |||||||| || || || ||||||||||| || || ||||| ||| ||
Sbjct 1 GAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCCTGAATCTTAGCCTTAAC 60
Query 225639 AGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|||||||||||||| | ||| || ||||| ||||| ||||| || ||||| |||||
Sbjct 61 GTTCTCGATGGTGTCTGATGGTTCAACTTCTAAAGTGATGGTCTTACCAGTCAAGGTTTT 120
Query 225699 TATGAACACTTGCAT 225713
| ||| | ||||||
Sbjct 121 GACGAAGATTTGCAT 135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1189001053862454
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |