Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq229830 89.7 4e-13 >seq229830 Length=7395 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/217 (70%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| ||| | ||||||||||||||||| ||||||||| || ||| |||| Sbjct 5770 AATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGTGCGTCCATCT 5711 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 |||||||||||||| || | || | | ||| |||||| ||| | ||||| ||||| Sbjct 5710 TCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCC 5651 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT-----TCGACGGTAA 101201 |||||| ||| |||| | | || || ||| | ||| || | ||||| Sbjct 5650 TGAATTTTAGCTTTAACATTTTCAATAGTATC---GGA--TGGTTCAACCTCCAAGGTAA 5596 Query 101202 TAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 | ||||| || ||||| || || | ||||| ||||| Sbjct 5595 TTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 5559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408507272126619