Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 455 4e-123
seq55846 93.3 6e-14
seq11307 89.7 7e-13
>seq54449
Length=2482
Score = 455 bits (504), Expect = 4e-123
Identities = 590/810 (73%), Gaps = 5/810 (1%)
Strand=Plus/Plus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|||||||||||||||| ||||||||| || ||||| ||||||| |||| ||||||||
Sbjct 299 GCGGGTTTTGTACGTAAATAGTACATTCCTGTTTTCAGACCCAATTTCCAAGCGTAGAAA 358
Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922
||||| || | ||| ||| | || || |||| ||||||||| | |||||||||
Sbjct 359 TGCATTGAAGTTAATTTTCCATAGTTTGGTTCTGCTACATGAATATTGAATGACTGACTT 418
Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGA-ATTTC 76981
||||| || ||||| ||||||||||| ||||||| || | | ||| ||| |||||
Sbjct 419 TGATCAATAAAAGCACCTCTATCAGCAGCCATTTGAATTGTAGA-TTTAATGGATATTTC 477
Query 76982 CCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG-TTTGTATTT--TGAATGGA 77038
||||| |||||| ||| || | |||||| |||||| ||| |||| || || ||
Sbjct 478 CCAAACAGTTTTATAAAGTTCTCTGATATGTGCTGGAATTCTTTCGATTTCTTGTATAGA 537
Query 77039 ACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAA 77098
||||| | ||| |||||| || || |||||||| | ||| || | |||||||||
Sbjct 538 ACCACGTTTTGAAATAATTTCGTTTTTCATATCATCGTCCCATAAATCAAGCTCTGTTAA 597
Query 77099 AACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTA 77158
| | || | ||| | || || | ||| || || ||||| ||||||| ||| | ||
Sbjct 598 GTCCTTGAGCAAATGGTGGTTTACAACTTGGAACTCACCAGATAATACTCGACGGTTATA 657
Query 77159 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGC 77218
|||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 658 AATATTTGAAGTATATGGTTCGAATGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGC 717
Query 77219 AGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 77278
||||||||| ||||| | |||||| |||||| | ||||| | |||||||| ||
Sbjct 718 AGTTGGCATTGGTGCAATCAATAATGAATTTCTTACTCCATGAACCTTTATTTTATCCTT 777
Query 77279 TAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338
|||| || ||||||||| | ||| | || ||||| | ||| ||||||| ||
Sbjct 778 TAGAGCTTGCCAATCCCACAAATCAGTTGGGGTTTTGTCCCACATATCATATTGTAAGAT 837
Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398
||| || ||| | ||| | |||||||||||||| || ||| ||||||| |||||
Sbjct 838 TCCTTTGCTAACTGGGCTTCCCTCATATGTTTCATAAGTACCCTCTTTTTCAGCAAGTTC 897
Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458
|||||| ||||| | ||||| ||||||||||| || || || | || ||| || ||
Sbjct 898 ACAACTTGCTTCAAGAGCTCCATAATAAATTGTCTCAAATATTTGCTGATTAAGCAACTG 957
Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518
|| | ||| || | |||||| | | |||||| || ||||| | || || || ||
Sbjct 958 AGCCTTTTCACTTTCGTAAGGATAACGCATAAGAATCAAAGCATCAGAGAAACCTTGTAC 1017
Query 77519 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATA 77578
|| || || ||||| || || | ||| || || ||||||| || | ||||||||
Sbjct 1018 ACCGATCCCGATAGGCCTGTGACGTAAATTTGACTTTCTAGCTTCAGGCAATGGATAATA 1077
Query 77579 ATTAATGTCTATAATTTTATTGAGATTTCT 77608
||||| ||||| ||||| || | ||||||
Sbjct 1078 ATTAACATCTATTATTTTGTTTAAATTTCT 1107
Score = 387 bits (428), Expect = 2e-102
Identities = 673/965 (70%), Gaps = 19/965 (2%)
Strand=Plus/Plus
Query 77679 GCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCG 77738
||||| || |||| ||||||||| || | |||| | | ||| | || || ||
Sbjct 1285 GCTATGGAAGCTAAATTACAAACGGCGATTTCATCTGGAGCAGAATACTCTACGATTTCA 1344
Query 77739 GTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCAT 77798
|| || ||||||||||| || || || || | ||||||||| || |||||| | |||||
Sbjct 1345 GTGCAGAGATTACTACACTTAATTGTACCAACATTTTGTTGATTACTCTTTCTGTTGCAA 1404
Query 77799 GAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTC 77858
| || || || | ||| | ||||| || ||||| | ||||| || ||||| | | |
Sbjct 1405 GCATCTTTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGACTCAATAATTGCATAC 1464
Query 77859 CAGACGACTCTAGCTTTTATCATAGA-TTTGTATCGCCTCTCTCTTTCATATTGAGTATA 77917
|||| | ||||||||| | |||| | ||| || ||||||| | | ||||
Sbjct 1465 CAGAGTTGTTGAGCTTTTATTTTCCTGTTTGCTTTTCCT-TCATTTTCATACTTAATATA 1523
Query 77918 TAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACAT 77977
|| |||||||| || ||||||||||| | |||||| || |||| | || |||||
Sbjct 1524 GAGTTTCTCAAATTCTTCACCCCAAACATCGTGCAATCCGGGACATTTGTGAGGACACAT 1583
Query 77978 CAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGC 78037
| ||||| || | || ||| ||| ||||||||||| | ||| || ||||||| |||
Sbjct 1584 AAGAGACCAATCTTCGTCAGCCTCAACACGTTTCATAAACAAATCTGGAATCCATAAAGC 1643
Query 78038 AATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAA 78097
|| ||||||| | || | ||||| |||||||| || || || | ||| | |||
Sbjct 1644 GTAGAAAAGATCTCTAGCTCGGTTCTCTTCTTTTCCTGTGTTTTTCTTCAAATCCAAAAA 1703
Query 78098 CTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATT 78157
|| | |||||| |||||||| ||||| | ||| ||||| | ||||||| | || ||
Sbjct 1704 TTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATTGCGAATGCTCCAGGCCTCTTGTT 1763
Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217
||||| ||||||| ||||| ||| ||||| | ||||| ||||| |||| | |||
Sbjct 1764 GCCTCCTTGATCTACATATCGGGCAACATTATTGAAGACTCTTAACATGGGAACTAAACC 1823
Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA----TTACTAA 78273
|| || |||||||| ||||||| |||| | || | || |||||| ||| |
Sbjct 1824 ATTTGAAGTTCCATTAGTTCCAGCAATAGCTGTCCCTTTAGCCCGAATACAGTGTAC--A 1881
Query 78274 TGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTA-TCG 78332
| || || ||||| ||||| ||| || || | ||| || | ||||| | | | |
Sbjct 1882 T--TTAATCCGATTCCGCCTGCAGACTTGGAAATCATAGCACATTG-TTCAACGGACTTG 1938
Query 78333 TAGATACCCTCTAT--ACTGTCATC-CATCATGTTAAGAAGAAAACAGCTAGACATTTGA 78389
|||| || ||||| | | | | | ||| |||| ||||||||||| ||||| ||||
Sbjct 1939 AAGATCCCTTCTATGGAATCTGAGCACAT--TGTT-AGAAGAAAACATGAAGACAATTGA 1995
Query 78390 TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAA 78449
| || | ||| |||||| || ||||| || || |||| | |||||||
Sbjct 1996 GGCCTTGGTGTGGCAGCAGCAAATAACGTTGGAGAGGCGTGAATAAAATACCTTTCAGAT 2055
Query 78450 AGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACA 78509
| ||||| ||||| |||||||||| |||||||| | |||||||||||| || ||
Sbjct 2056 AAAAGATTATATGTCTCAATAGCTGCATCTATGTCGTTTCCATGAATTCCTACAGCGACT 2115
Query 78510 CGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGAT 78569
| ||| | ||| || |||||||||||| | | || |||||| ||||| | |||||
Sbjct 2116 CTCATAAGCATGTGTTGAGGTCTTTCAGCAATTTTTCCATTTATCTTCAAAAGATATGAG 2175
Query 78570 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACA 78629
||||| |||||||| ||||| || |||||| ||| |||| || ||||| |||
Sbjct 2176 CGCTCCAATGTTTTAAATCCAAAGTAATTGTATCCAAA-ACTCTATCATAAATGATAGAT 2234
Query 78630 GAATT 78634
|||||
Sbjct 2235 GAATT 2239
>seq55846
Length=11783
Score = 93.3 bits (102), Expect = 6e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 43294 AATTCCCAATTCCTTGACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATA 43353
|| ||| | ||| || || ||||||||||| | ||||||||| || |||||||| | ||
Sbjct 10808 AACTCCTAGTTCTTTAACTTGTGTTAGAGACCTCCAATCCATATTCGCACTTCCAATGTA 10867
Query 43354 AATATGTCTATTATCTGATATCCAAAATTTAGTATGAAGAACTCCACCT 43402
|| ||| |||||| | |||||||| ||||| ||||||||||| |||
Sbjct 10868 AAAGTGTTGATTATCAGCTATCCAAATCTTAGTGTGAAGAACTCCGCCT 10916
>seq11307
Length=4647
Score = 89.7 bits (98), Expect = 7e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 78746 AAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGC 78805
|||| ||| || ||||| ||||||| || || ||||| ||||| ||||||| |||||
Sbjct 3747 AAATGCTTTCTTAGTTTCTTTGTGTAAGTTGGAAACAGCAATTCTAGCAGCTAAGATAGC 3806
Query 78806 ATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTC 78865
|||||| | ||||| ||| || |||| ||||| |||| || || | | |||| | ||
Sbjct 3807 ATAATCTGCATGTTTTGTGGTCAAAGTTGCTGCCGTTTCAGCGGCGAGATTATCCAGTTC 3866
Query 78866 TATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904
| ||| || || || | | || || | |||||| ||
Sbjct 3867 TTGAGTCGTTACACCGCAAAAAAGGCCGTTAATAACCTT 3905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 692662587822240
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