Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq160753 114 3e-20
seq229830 111 4e-19
seq80618 111 4e-19
>seq160753
Length=592
Score = 114 bits (126), Expect = 3e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958
|||||| || ||||| ||||| ||||| ||||| | || || | |||||||| | |
Sbjct 160 ATGAAGGGTTGACTCCTTTTGAATGTTATAATCTGACAATGTGCGTCCATCTTCCAACTG 219
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|||| ||||||||||| | | || || || | | ||| |||||||| ||||||||
Sbjct 220 CTTT--CCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCTTGAATC 277
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
|| || || |||| | | ||||||| ||| |||||||| || |||||||| ||
Sbjct 278 TTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGTGATAGTTTTTCCA 337
Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104
|| | ||| || ||||| | ||||||
Sbjct 338 GTCAAAGTTTTGACGAAAATCTGCAT 363
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| ||||| ||||||||||| ||||| | ||| || | |||||||| |
Sbjct 385 CAAG-TGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGTGCGTCCATCTTCCA 443
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || |||||||| | | ||||| || | | ||||||||| || || || |
Sbjct 444 ATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGA 503
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| || || |||||||| || ||||||||||
Sbjct 504 TCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTTTTGC 563
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | || || ||||||| ||||||
Sbjct 564 CAGTCAAGGTTTTGACGAAGATCTGCAT 591
>seq229830
Length=7395
Score = 111 bits (122), Expect = 4e-19
Identities = 152/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || || |||||||| |||||||||||| ||||| | |||||||| |
Sbjct 5765 CAAG-TGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGTGCGTCCATCTTCCA 5707
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || |||||||| | | |||||||| | | |||||||||||| || ||||
Sbjct 5706 ATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGAA 5647
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| ||| ||| | || | | || || || || || | ||||| ||||| |
Sbjct 5646 TTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAAGGTAATTGTTTTAC 5587
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | |||||| ||
Sbjct 5586 CAGTCAAAGTCTTGACGAAAATCTGCATATT 5556
Score = 102 bits (112), Expect = 2e-16
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||| ||||| ||| |||||| | |||||||| |
Sbjct 6220 CAAG-TGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTTAAAGTGCGACCATCTTCCA 6162
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| ||||| ||||| || | || || || | | || ||||| || |||||||
Sbjct 6161 ATTGTTTACCGGCAAAGATGAGACGTTG-TGATCTGGAGGAATACCTTCTTTGTCTTGAA 6103
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| || ||| ||||| | |||||||| || |
Sbjct 6102 TCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAACTTCTAAGGTAATAGTCTTTC 6043
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | |||||| ||||||| |||||
Sbjct 6042 CAGTCAAAGTCTTGACGAAGATTTGCAT 6015
>seq80618
Length=357
Score = 111 bits (122), Expect = 4e-19
Identities = 153/211 (73%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| ||||| || |||||||||||||| |||| || || | |||||||| |
Sbjct 330 CAAG-TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCATCTTCCA 272
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||||| ||||||||||| | | || || || | | ||||||||| || |||||
Sbjct 271 ATTGCTTT--CCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTG 214
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || |||||| | || | | |||| ||| || ||||| | ||||| || ||
Sbjct 213 GATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTAATGGTCTT 154
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || | |||||| ||||| | |||||||
Sbjct 153 ACCAGTCAAAGTCTTGACGAAAATCTGCATT 123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150405244884511
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |