Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq80618 174 3e-38
seq229830 149 1e-30
seq160753 145 2e-29
seq216245 89.7 1e-12
seq54491 89.7 1e-12
>seq80618
Length=357
Score = 174 bits (192), Expect = 3e-38
Identities = 178/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| || || | |||| || | || ||| ||||||||||||||||| |
Sbjct 351 ACCACCACGGAGACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGA 292
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| ||||| ||||| || | ||| || ||||| ||||||||||||||||| || |
Sbjct 291 CAAG-GTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTG 233
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
| || || || |||||||||||||| || || || | || || ||||| |||| ||| |
Sbjct 232 GGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAA 173
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||| | || || |||||||| ||||||||||| ||||| |||||||||
Sbjct 172 CTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATT 123
>seq229830
Length=7395
Score = 149 bits (164), Expect = 1e-30
Identities = 148/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||| ||||| ||||| | | ||||| || || || | |||||| || |||||
Sbjct 5978 TTCTTTTTGAATGTTATAGTCTGACAATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAA 5919
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||||||||||||| || |||||||| || |||||||||||||| || || ||| |
Sbjct 5918 GATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTGGCCTTAACGTT 5859
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| || ||||| | ||||| || || || ||||| || || ||
Sbjct 5858 TTCAATTGTGTCAGAAGGCTCAACTTCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGAC 5799
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 5798 GAAAATTTGCAT 5787
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || | ||||| || | || ||||||||| |||||||| ||
Sbjct 5786 ACCTCCACGAAGACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCT 5727
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||||| ||||| || | |||||| || || |||||||||||||| ||||| ||
Sbjct 5726 CAAAGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGG 5667
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || |||||||| || || || ||||| || | || ||||| || || | ||| ||
Sbjct 5666 GATTCCTTCCTTGTCCTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAAC 5607
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | || || || ||||| ||||||||||| ||||| |||||||| ||
Sbjct 5606 CTCCAAGGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCATATT 5556
Score = 141 bits (156), Expect = 2e-28
Identities = 169/228 (74%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || ||||| |||| || | || ||| |||||||| ||||||||
Sbjct 6241 ACCTCCTCGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCT 6182
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||||| ||||| || | |||||| ||||||||||| | ||||||| | || ||
Sbjct 6181 TAAAGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATGAGACGTTGT-GATCTGGAGG 6123
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| || |||||||| ||||| || || ||| | || || ||||| || | || ||
Sbjct 6122 AATACCTTCTTTGTCTTGAATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAAC 6063
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || ||||| || ||||||||||| ||||| || |||||
Sbjct 6062 TTCTAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 6015
Score = 104 bits (114), Expect = 5e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||| ||||| ||||| ||| ||||||||||| || || || || ||||||||
Sbjct 130 TTCTTTTTGAATGTTATAGTCGCTAAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAA 71
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|| | ||| ||||| || ||||| || |||||||| |||||||| ||||| ||| |
Sbjct 70 AATGAGACGCTGTTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTT 11
Query 283028 ATCGATAGTG 283037
|| || |||
Sbjct 10 TTCAATGGTG 1
>seq160753
Length=592
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || | ||||| ||| | || || ||||| ||||| || || |
Sbjct 136 ACCACCACGGAGACGCAATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAATCTGA 195
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||||| ||||| || | || || ||||| ||||||||||||||||| || ||
Sbjct 196 CAATGTGCGTCCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGG 255
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||| ||||| ||||| || || ||| | || || ||||| || | || ||
Sbjct 256 GATACCTTCCTTATCTTGAATCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAAC 315
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || ||||| || || || |||||||| || ||||| ||||||||
Sbjct 316 TTCAAGGGTGATAGTTTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 363
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| |||| || | || || ||||||||||| || || |
Sbjct 364 ACCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGA 423
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||||| ||||| || | |||||| || || |||||||||||||| || || ||
Sbjct 424 TAATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGG 483
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || || || || |||||||| || || ||| | || || ||||| || | ||| ||
Sbjct 484 GATTCCTTCTTTATCCTGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAAC 543
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || ||||| || || || ||||| || || ||||| ||||||||
Sbjct 544 TTCAAGGGTGATAGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591
Score = 111 bits (122), Expect = 3e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 282966 AAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACG 283025
||||||||||||||||| || || ||||| ||||| || || ||||| || || |||
Sbjct 2 AAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCCTGAATCTTAGCCTTAACG 61
Query 283026 GTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTA 283085
| ||||| ||||| || | ||| ||||| | |||||| |||||||| ||||| || ||
Sbjct 62 TTCTCGATGGTGTCTGATGGTTCAACTTCTAAAGTGATGGTCTTACCAGTCAAGGTTTTG 121
Query 283086 ACGAATATCTGCAT 283099
||||| || |||||
Sbjct 122 ACGAAGATTTGCAT 135
>seq216245
Length=1448
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1389 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 1445
>seq54491
Length=5963
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 5702 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 5758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1043640629208814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |