Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq80618 122 6e-23
seq160753 111 1e-19
seq229830 95.1 9e-15
>seq80618
Length=357
Score = 122 bits (134), Expect = 6e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGT 44183
|||||||| |||||| || ||||||||||||||||| |||| | || || || | |
Sbjct 336 CAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTG-CGTCCAT 278
Query 44184 CGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTT 44243
| |||| ||||| ||||| ||||||||||| || ||||||| || | ||||| || |
Sbjct 277 CTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTGT 218
Query 44244 CCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
| ||||| ||| | || | |||||||||| | ||| || |||| ||||| |
Sbjct 217 CTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTAATGG 158
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || | ||||| ||||| || |||||
Sbjct 157 TCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 124
>seq160753
Length=592
Score = 111 bits (122), Expect = 1e-19
Identities = 167/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | ||| |||| ||||| || ||||||||| ||||| ||
Sbjct 130 TTGCATACCACCACGGAGACGCAATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATA 189
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | | | ||| | || |||| |||||| ||||| ||||||||||| || |||||
Sbjct 190 ATCTGACAATGTGCGTCCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATC 249
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| ||| | ||||||||| || ||||| || | || |||| | |||||||| | |
Sbjct 250 TGGAGGGATACCTTCCTTATCTTGAATCTT-AGCCTTAACGTTCTCAATGGTGTCTGATG 308
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | || || || ||||| || | || || ||||| || |||||
Sbjct 309 GCTCAACTTCAAGGGTGATAGTTTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 363
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || ||||||||||||||| ||||| | | | ||| | || |||
Sbjct 383 ACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGTGCGTCCATCTTCC 442
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| || || || || ||||||||||| |||||||||| ||| | ||||| || |||
Sbjct 443 AATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGG 502
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | || | || ||||| | | ||| || || | || || || ||
Sbjct 503 ATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTTTTG 562
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||| || |||||||| |||||
Sbjct 563 CCAGTCAAGGTTTTGACGAAGATCTGCAT 591
Score = 87.8 bits (96), Expect = 1e-12
Identities = 102/135 (76%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAAT 44263
||||||||||| || ||||||| ||| | ||||||||| ||| ||||| || | ||
Sbjct 2 AAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCCTGAATCTT-AGCCTTAAC 60
Query 44264 GTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTT 44322
|||| | |||||||| | | ||| || || | || || ||||| || || | ||| ||
Sbjct 61 GTTCTCGATGGTGTCTGATGGTTCAACTTCTAAAGTGATGGTCTTACCAGTCAAGGTTTT 120
Query 44323 CACGAAGATTTGCAT 44337
||||||||||||||
Sbjct 121 GACGAAGATTTGCAT 135
>seq229830
Length=7395
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| |||||| || ||||||||||| ||||| ||| | ||| | || |||
Sbjct 6222 ACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTTAAAGTGCGACCATCTTCC 6163
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| || || ||||||||||| | ||| || ||||||| ||| | |||||| || ||
Sbjct 6162 AATTGTTTACCGGCAAAGATGAGACGTTG-TGATCTGGAGGAATACCTTCTTTGTCTTGA 6104
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | || | || ||||| | | || || || | ||||| ||||||
Sbjct 6103 ATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAACTTCTAAGGTAATAGTCTTT 6044
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| ||||||||||||||
Sbjct 6043 CCAGTCAAAGTCTTGACGAAGATTTGCAT 6015
Score = 93.3 bits (102), Expect = 3e-14
Identities = 163/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | ||| |||| |||||| || || ||||| ||||||||
Sbjct 5792 TTGCATACCTCCACGAAGACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTA 5733
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| | ||| | || |||| || || || || ||||||||||| ||||| ||
Sbjct 5732 ATCGCTCAAAGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTC 5673
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282
|| || | |||||||| ||| | | || |||| || || | || || |||| |
Sbjct 5672 TGGGGGGATTCCTTCCTTGTCC-TGAATTTTAGCTTTAACATTTTCAATAGTATCGGATG 5614
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||||| ||||| || || || || | ||||| ||||| || |||||
Sbjct 5613 GTTCAACCTCCAAGGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 5559
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||| || | || || | || || || || ||||| ||||| ||
Sbjct 6020 TTGCATACCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATA 5961
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | | | ||| |||| |||| || || || |||||||||||||| || |||||
Sbjct 5960 GTCTGACAATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATC 5901
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| ||| | |||||| || || ||||| ||| | || | || ||||| | |
Sbjct 5900 TGGAGGAATACCTTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGG 5841
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| || || || ||||| || | ||| || ||||| ||||||||
Sbjct 5840 CTCAACTTCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCAT 5787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 358976734644297
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |