Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq38155 111 2e-19 >seq38155 Length=21922 Score = 111 bits (122), Expect = 2e-19 Identities = 220/323 (68%), Gaps = 12/323 (4%) Strand=Plus/Minus Query 155739 GCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGTT 155798 || || ||||| || || | || || ||||| | |||||| |||||| |||| ||||| Sbjct 13651 GCGGTGGATTGGGCTGCCCTGACTAAACCTTCAAGTTCAGCACCGCTGAAATTCTTAGTC 13592 Query 155799 TCAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGATT---TCAT- 155854 | || |||| || ||||| |||| || | | || | | | | |||| Sbjct 13591 ATAGAAGCAATTTCCTTATTATCTACATCGGGGGCAA---TCTTATTAAACTCTCTCATA 13535 Query 155855 --TTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATT 155912 ||| | | || | || |||||||| | ||| || |||| ||||| | |||| Sbjct 13534 CGTTTTGTA---TGAATATTCAAAATTTGTACACGACCAGACTCATTCGGTAAACTAATT 13478 Query 155913 TCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTG 155972 || || | | |||||| || ||||||| | ||| ||||| ||||| | || | | Sbjct 13477 TCCATTTGTACTTCCAAGCGACCAGGTCGAAGTAAAGCTTCATCAATCATATCACGACGA 13418 Query 155973 TTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAAT 156032 |||||||| || |||| || ||||||||| || ||| |||||||| ||||| | || Sbjct 13417 TTGGTCATTCCAATGACTAGAATGTTGTTCAACTGTTCCACACCGTCAATTTTGGCCAGC 13358 Query 156033 AATTGATTGACTACGGCGTCGTG 156055 ||||||||||| || | ||| || Sbjct 13357 AATTGATTGACAACTGTGTCATG 13335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665148678483960