Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq141 102 7e-17 >seq141 Length=486598 Score = 102 bits (112), Expect = 7e-17 Identities = 160/227 (70%), Gaps = 8/227 (4%) Strand=Plus/Plus Query 18625 TAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCG 18684 |||||||||| || || ||||||| || || |||| |||||| ||||||||||| | | Sbjct 106308 TAACTACAAAACGAGTGTTTTGGAAGGGTGTGCTGGAGGAGTTGCTATGGTTTATCAGAG 106367 Query 18685 GGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGAT 18744 | ||||| | |||| ||| | |||| || || | |||||||||||| || | | Sbjct 106368 GTTCAACAAACGCCAAGGAATTGGCCGAAAAGAATGTTCACATATGGGATGCGAACAGCT 106427 Query 18745 CGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGG--GGACCTT--GGC 18800 || | || || | ||| ||||||| | ||||| | || ||| || || Sbjct 106428 CGCGTAACTTCTTGAATTCCTCTGGCTTC----ACAGACAGAGAGGAAGGAGATTTGGGA 106483 Query 18801 CCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGA 18847 || | || || || ||||||||||||||||| || ||||| ||||| Sbjct 106484 CCTGTCTATGGTTTTCAGTGGAGACATTTTGGTGCAGAATACAAAGA 106530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399490045574970