Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq141 111 1e-19 >seq141 Length=486598 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| |||||||| || ||||| ||||||||||| ||||| |||||||| | |||||||| Sbjct 106529 CTTTGTATTCTGCACCAAAATGTCTCCACTGAAAACCATAGACAGGTCCCAAATCTCCTT 106470 Query 102093 CATCTCTGTCATAAAAACCA-AGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAA 102151 | |||||||| || ||| || || | || | | | || | ||||||||||| Sbjct 106469 CCTCTCTGTCTGTGAAGCCAGAGGAATTCAAGAAGTTA-CGCGAGCTGTTCGCATCCCAT 106411 Query 102152 ATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAAC 102211 ||||| || | | | | || ||| || || || |||||||||||||| | | Sbjct 106410 ATGTGAACATTCTTTTCGGCCAATTCCTTGGCGTTTGTTGAACCTCTGATAAACCATAGC 106351 Query 102212 AGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 | || || | ||||| ||||||| |||| || ||||||| | |||||| Sbjct 106350 AACTCCTCCAGCACACCCTTCCAAAACACTCGTTTTGTAGTTAGTAATGGAAA 106298 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 101767 CATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGC 101826 |||| |||||| | ||||||| || || ||||| || || || | ||||| || || Sbjct 106882 CATGTAAGTTAGCAAAGAATAGGACGCGATATTAAACGGTACGCCAAGACCCATGTCTGC 106823 Query 101827 TGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATAC 101886 ||||||||| |||||||| || | || ||||| | || || |||||| || Sbjct 106822 GCTTCTTTGATAAAGTTGACACGACAACTCTCCATTGCTTACGTAGAATTGAACGAAACA 106763 Query 101887 ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACAT 101946 ||| ||||| ||||| ||||||| || || || ||||| || ||||| || Sbjct 106762 ATGGCAAGGAGGCAAAGCCATTTTTGGTATATCAATTGGGTTCCATGCTGTCATTATAAT 106703 Query 101947 CCTTCTATC 101955 ||||||||| Sbjct 106702 CCTTCTATC 106694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361238581721366