Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq65 82.4 6e-11 >seq65 Length=2871674 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | || || | || | ||| || || |||||||||||||| || | Sbjct 610648 CCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATGTTATAATCAGAA 610707 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | |||| |||| |||||||| || |||| | |||||||||||| ||| Sbjct 610708 AGTGTGCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGA 610767 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || || ||| || | | | || ||| || ||| | Sbjct 610768 ATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCAACT 610827 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | |||||| || || || || | || || || || ||||||||| Sbjct 610828 TCAAGGGTAATAGTTTTACCCGTGAGAGTCTTAACGAAAATTTGCATT 610875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422244450750056