Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq141 104 2e-17 >seq141 Length=486598 Score = 104 bits (114), Expect = 2e-17 Identities = 175/251 (70%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 97369 CCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTG 97427 |||| ||||| ||||| ||| | | | ||| |||||||| |||||||| ||||| || Sbjct 106557 CCTTGTCCACTATAATCTGTA-TGCATATCTTTGTATTCTGCACCAAAATGTCTCCACTG 106499 Query 97428 GAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAA 97487 || ||||| |||||||| | |||||||| ||||| || ||| ||| || || Sbjct 106498 AAAACCATAGACAGGTCCCAAATCTCCTTCCTCTCTGTCTGTGAAGCCAGAGGAATTCAA 106439 Query 97488 ATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCT 97547 || | || | || |||||||| ||||| ||| | | || | || ||| Sbjct 106438 GAAGTTACGCGAGCTGTTCGCATCCCATATGTGAACATTCTTTTCGGCCAATTCCTTGGC 106379 Query 97548 GTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCT 97607 || || || |||||||||||||| | ||| || |||| ||||| ||||||| |||| Sbjct 106378 GTTTGTTGAACCTCTGATAAACCATAGCAACTCCTCCAGCACACCCTTCCAAAACACTCG 106319 Query 97608 CTTAGTTGTTA 97618 || || |||| Sbjct 106318 TTTTGTAGTTA 106308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346771887051620