Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq41 95.1 2e-14 >seq41 Length=2258467 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 189396 GAAAGTATATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGA 189455 |||| ||| ||||||| | | ||| | ||||| ||||||| ||| |||||||| Sbjct 2054729 GAAAATATGTATATTCTTTAAGTCAATTAGAAAATTTTAAAACTCACGATGATCTATGGA 2054788 Query 189456 ACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATT 189515 | || | |||| || ||||| | ||||| |||||| | |||||| ||||||||| Sbjct 2054789 ATGCATGTCAAAATCAAATGGTAATGATTGGAAAGATGCATGGATTTTTAAGAATGTATT 2054848 Query 189516 GGGCTAAGAAGATACTTGAATGGACTAGAACACCTGA 189552 |||| || || ||| | ||||||||| || |||||| Sbjct 2054849 GGGCAAAAAAAATATTAGAATGGACTGAAATACCTGA 2054885 Score = 91.5 bits (100), Expect = 3e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 189623 GTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATA 189682 |||||||| |||||||||||||| || | || ||| | ||| ||||||| ||| Sbjct 2055031 GTAGGTTGCATGTGGTCTATTTGTGGTGTCCATGATCATGGTTGGTCAGAAAGAGATATA 2055090 Query 189683 TTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTGTA 189742 ||||| || |||||||| |||||||||||| | | ||| |||||| ||||||| | | Sbjct 2055091 TTTGGGAAAATAAGATACATGAATTATGAGGGATGTAAACGAAAATTTAATGTTGCCGAA 2055150 Query 189743 TTT 189745 ||| Sbjct 2055151 TTT 2055153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923163726474640