Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq141 87.8 1e-12 >seq141 Length=486598 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 20346 CCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGC 20405 |||||| || ||||| ||||| | || |||||| | | ||| | || |||||| Sbjct 106687 CCCAAATGATAGAAGGATTATAATGACAGCATGGAACCCAATTGATATACCAAAAATGGC 106746 Query 20406 TTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATGAATTGTCGTGTC 20464 ||||||||| || ||| || | | ||||| ||||| ||| || |||||||||| Sbjct 106747 TTTGCCTCCTTGCCAT-TGTTTCGTTCAATTCTACGTAAGCAATGGAGAGTTGTCGTGTC 106805 Query 20465 AAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATG 20524 || | |||||| || ||| || ||||| || || || || || ||||| || ||| Sbjct 106806 AACTTTATCAAAGAAGCGCAGACATGGGTCTTGGCGTACCGTTTAATATCGCGTCCTATT 106865 Query 20525 CGCTGCTTACGTATATGATTGCACATGTTACAGATTTaaa 20564 | |||| || || ||| | |||| ||||| |||| || Sbjct 106866 CTTTGCTAACTTACATGCTGACACACATTACAAATTTGAA 106905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399170056752370