Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq190 93.3 3e-14 >seq190 Length=691288 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| |||| | ||| || ||||| || || || ||||||||||||||||||||| Sbjct 260297 GCCTCCTCGAAGTCTCAACACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCCGA 260238 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || | | || || | |||||| || ||||| || || || || ||||| ||||| Sbjct 260237 AAGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAAGATTAAACGTTGCTGGTCAGGAGG 260178 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || || ||||| |||||| |||||| | | | |||| | |||| || Sbjct 260177 AATTCCTTCTTTGTCTTGAATTTTCGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTAC 260118 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||| | ||||| || || || || || || || |||||||| |||||| Sbjct 260117 CTCGAGAGTAATAGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCATG 260069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395061400270186