Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq155 93.3 6e-14 >seq155 Length=3151304 Score = 93.3 bits (102), Expect = 6e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 19430 AAAATATATCTAGGACTTGCTGCATCTTTTCCTCCAGAAAGTCTCGTGCCAAATTGGCCA 19489 ||||| || | ||||||||||||||| |||||||| | |||||| || |||||||| ||| Sbjct 3004386 AAAATGTAACGAGGACTTGCTGCATCCTTTCCTCCTGCAAGTCTTGTACCAAATTGACCA 3004327 Query 19490 TCCTCTTCTAAAAGAGGTATGTTATTGGCTCCAACAAAAGTTTGTGCCATTTTAATGATA 19549 | || | | | ||| ||||| |||||| ||| ||||||| | |||||||| Sbjct 3004326 ATCGGTTGAAGTAAATTTATATTATTACTTCCAACGAAATTTTGTGCAAGATTAATGATT 3004267 Query 19550 G-TGTCAAATAGATTTTGTTCTCCATGTTTATAATCTGTTTTTTGTGCTACGAAAGCTCC 19608 | || || | ||| ||| ||||| | ||| | | | || ||||| || | | Sbjct 3004266 GTTGACATA-AGAGAGACTTCACCATGGTGATATGCAGAATGTTCAGCTACAGAACCAGC 3004208 Query 19609 TAATTGGGCAACTTT 19623 |||||| |||||||| Sbjct 3004207 TAATTGTGCAACTTT 3004193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679790045649120