Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq190 190 5e-43 seq65 176 1e-38 seq139 145 2e-29 seq2840 116 9e-21 seq26 116 9e-21 seq25 100 7e-16 seq41 87.8 4e-12 >seq190 Length=691288 Score = 190 bits (210), Expect = 5e-43 Identities = 168/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| | ||| | ||||||||| || || |||||||| || || |||||||| || ||||| Sbjct 255276 TACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCCGAAAGAGTTCTCCCATCTTC 255217 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || |||||| ||||||||||| || | ||||||||||| || ||||||||||| || || Sbjct 255216 TAATTGTTTGCCAGCAAAAATCAGACGTTGTTGATCAGGGGGAATTCCTTCTTTGTCTTG 255157 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||| ||||| || ||||| |||| || || || |||||||| || |||||||| || Sbjct 255156 AATTTTTGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTACCTCAAGAGTAATAGTTTT 255097 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| ||||| |||||||| Sbjct 255096 TCCTGTGAGTGTTTTGACAAAGATCTGCAT 255067 Score = 190 bits (210), Expect = 5e-43 Identities = 168/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| | ||| | ||||||||| || || |||||||| || || |||||||| || ||||| Sbjct 255504 TACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCCGAAAGAGTTCTCCCATCTTC 255445 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || |||||| ||||||||||| || | ||||||||||| || ||||||||||| || || Sbjct 255444 TAATTGTTTGCCAGCAAAAATCAGACGTTGTTGATCAGGGGGAATTCCTTCTTTGTCTTG 255385 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||| ||||| || ||||| |||| || || || |||||||| || |||||||| || Sbjct 255384 AATTTTTGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTACCTCAAGAGTAATAGTTTT 255325 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| ||||| |||||||| Sbjct 255324 TCCTGTGAGTGTTTTGACAAAGATCTGCAT 255295 Score = 176 bits (194), Expect = 1e-38 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || || | || ||||| | ||| |||||||||||||| ||||| || Sbjct 255980 ATGCCTCCTCGAAGTCTCAAAACAAGATGGAGTGTTGATTCTTTCTGAATGTTATAATCT 255921 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || || |||| |||||| ||||| || |||| | || || |||||| Sbjct 255920 GACAGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAAGATTAAACGTTGCTGGTCAGGA 255861 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || ||||| |||||||||| || || || |||| Sbjct 255860 GGAATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTTCTATTGTGTCAGAAGCTTCT 255801 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | || || |||||||| || || ||||| ||||| |||||||| Sbjct 255800 ACTTCCAAGGTGATGGTCTTACCTGTGAGCGTTTTAACAAAAATCTGCAT 255751 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| | ||| | ||||||||| || || ||||| || || || |||||||| || ||||| Sbjct 260507 TACCAAATGGAGTGTAGATTCCTTTTGGATATTGTAATCCGAAAGAGTTCTTCCATCTTC 260448 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || ||| || ||||||||||| | | ||||| |||||||| |||||||||||||| || Sbjct 260447 TAATTGCTTGCCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCTTTATCTTG 260388 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 || || ||||| ||||| |||| ||||| | ||||||||| || |||||||| || Sbjct 260387 GATTTTAGCTTTCACATTCTCTATTGTATCTGAGGCTTCTACCTCAAGAGTAATAGTTTT 260328 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| ||||| || ||||| Sbjct 260327 TCCTGTGAGTGTTTTGACAAAAATTTGCAT 260298 Score = 170 bits (188), Expect = 4e-37 Identities = 156/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||||||||||||||| || || || |||||||| || ||||||| |||||| ||| Sbjct 255035 GTAGATTCTTTCTGAATATTGTAATCTGAGAGAGTTCTTCCATCTTCTAATTGTTTACCA 254976 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | | ||| || || ||||| ||||| ||||| || || ||||||||||| Sbjct 254975 GCAAAAATCAAACGCTGCTGGTCTGGAGGAATTCCCTCTTTGTCTTGGATCTTTGCTTTC 254916 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| || || || ||| || || || |||||||| || || || | || Sbjct 254915 ACATTTTCTATTGTGTCAGAAGCTTCAACTTCAAGAGTAATAGTTTTTCCTGTTAAGGTC 254856 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 254855 TTAACAAAGATCTGCAT 254839 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || || | || | ||| | ||||| || |||||||| || ||||| Sbjct 260299 ATGCCTCCTCGAAGTCTCAACACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCC 260240 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || || |||| |||||| ||||| || |||| | || || |||||| Sbjct 260239 GAAAGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAAGATTAAACGTTGCTGGTCAGGA 260180 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || || || ||||| |||| || || || ||| Sbjct 260179 GGAATTCCTTCTTTGTCTTGAATTTTCGCCTTAACATTCTCTATTGTGTCTGAAGCCTCT 260120 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || |||||||| || || || |||||||| ||||| |||||||| Sbjct 260119 ACCTCGAGAGTAATAGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCAT 260070 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| ||||| | ||| |||||||||||||| |||||||| || |||||||| || ||||| Sbjct 255732 TACAAGATGGAGTGTTGATTCTTTCTGAATGTTATAGTCTGACAGAGTTCTCCCATCTTC 255673 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || ||||| |||||||| || | | ||| || || ||||| ||||| ||||| || || Sbjct 255672 TAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCCTCTTTGTCTTG 255613 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 ||||||| ||| || || |||| || | || |||||| || | || || || || Sbjct 255612 GATCTTTGTTTTCACGTTCTCTATTGTGCCAGAAGCTTCTACTTCCAAGGTGATGGTTTT 255553 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | |||||| ||||| |||||||| Sbjct 255552 TCCTGTCAATGTTTTGACAAAGATCTGCAT 255523 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || || | ||| ||||| | ||| ||||||||||| || ||||| || Sbjct 256208 ATGCCTCCTCGGAGTCTCAATACAAGATGAAGTGTTGATTCTTTCTGTATGTTATAATCT 256149 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || || |||| ||||| ||||| || || | | ||| || || ||| Sbjct 256148 GACAGAGTTCTTCCATCCTCTAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGA 256089 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || ||||| || ||||| ||||| |||| || || || |||| Sbjct 256088 GGAATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTCTCTATTGTGTCTGAAGCTTCT 256029 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| || || || || || || | |||||| ||||| || ||||| Sbjct 256028 ACTTCTAACGTGATGGTTTTTCCTGTCAATGTTTTGACAAAGATTTGCAT 255979 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || |||| || || | |||| ||| | ||||||||| || ||||| || || || | Sbjct 256433 CCACCTCGGAGTCTTAAAACTAAATGGAGTGTAGATTCCTTTTGAATGTTGTAATCCAAC 256374 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||| || ||||||| || || |||||||| || | | || ||||||||||| Sbjct 256373 AAAGTTCTTCCATCTTCTAACTGCTTCCCAGCAAAGATCAAACGTTGCTGATCAGGAGGA 256314 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 ||||||||||| || ||||| || ||||| || ||||||| || || || |||||| Sbjct 256313 ATTCCTTCTTTGTCTTGAATTTTAGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCTACT 256254 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | || || || || || || ||||| || ||||| || ||||| Sbjct 256253 TCCAAAGTGATGGTTTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 256207 >seq65 Length=2871674 Score = 176 bits (194), Expect = 1e-38 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| | ||||| |||||||| || || || || ||||| ||||| ||| Sbjct 612241 ATGCCTCCTCTTAGACGTAGTACAAGATGTAAAGTCGACTCCTTTTGAATGTTATAATCA 612300 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | |||||||||||||| ||||||||||| || | |||||||| || ||| Sbjct 612301 GAAAGTGTACGTCCGTCTTCTAGTTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGA 612360 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || ||||| |||||||| || ||||| | ||||| | ||| Sbjct 612361 GGAATTCCTTCCTTGTCTTGAATTTTTGCTTTCACGTTTTCAATTGTATCTGATGCTTCA 612420 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || ||||| || | ||| || || || |||||||| Sbjct 612421 ACCTCCAGGGTTATCGTTTTACCTGTCAATGTCTTGACGAAGATCTGCAT 612470 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | | ||| || ||||| | || ||||| || ||||||||||| || Sbjct 611785 ATACCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGAATATTATAATCG 611844 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| | ||| || || ||||| || | || || ||||| || Sbjct 611845 GAAAGTGTGCGTCCATCTTCCAATTGCTTGCCGGCAAAGATCAATCTTTGCTGATCTGGT 611904 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || || |||||||| |||||||| |||||||| | |||||| | ||| Sbjct 611905 GGAATTCCCTCCTTGTCCTGAATTTTTGCTTTGACATTTTCAATGGTATCAGACGCTTCA 611964 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||||||||| |||||||| ||||||||||| || ||||| Sbjct 611965 ACCTCCAAGGTAATAGTCTTTCCAGTAAGAGTTTTTACAAAAATTTGCAT 612014 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | ||| || ||||| | || || || || || |||||||| ||| Sbjct 610873 ATTCCTCCTCTCAAACGAAGAACAAGATGAAGGGTTGACTCCTTTTGGATATTATAATCA 610932 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | | | ||||||| |||||| || || || || | |||||| ||||| || Sbjct 610933 GACAATGTACGATCATCTTCTAATTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGT 610992 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| |||||||| || || ||||| || | || || || || Sbjct 610993 GGAATGCCTTCTTTATCTTGAATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCA 611052 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| || ||||| || || || || || || || ||||| Sbjct 611053 ACCTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611102 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | | || || ||||| | || ||||| || || || ||||| || Sbjct 611101 ATACCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCC 611160 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| |||||||||||||||||||| | || || ||||| || Sbjct 611161 GAAAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGC 611220 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||||||||| || || ||||| || | || || || || Sbjct 611221 GGAATACCTTCTTTATCCTGAATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCA 611280 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || || || || || || || ||||| Sbjct 611281 ACTTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611330 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | | || || ||||| | || ||||| || || || ||||| || Sbjct 611329 ATACCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCC 611388 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| |||||||||||||||||||| | || || ||||| || Sbjct 611389 GAAAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGC 611448 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||||||||| || || ||||| || | || || || || Sbjct 611449 GGAATACCTTCTTTATCCTGAATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCA 611508 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || || || || || || || ||||| Sbjct 611509 ACTTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611558 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| ||||| | || ||||| ||||||||||| ||||| || || || | ||||| Sbjct 612030 AAGTACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAGTCTGAAAGTGTACGTCCGTC 612089 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| | ||| || || || || || | || || ||||| || || || ||||||||||| Sbjct 612090 TTCCAATTGCTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCTTCTTTATC 612149 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 || || |||||||| || ||||| | ||||| | || || || |||||||| || Sbjct 612150 TTGGATTTTTGCTTTAACGTTTTCAATCGTATCTGAGGCCTCAACTTCGAGTGTAATTGT 612209 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || || || || || || ||||| Sbjct 612210 TTTACCAGTGAGAGTCTTGACGAAAATTTGCAT 612242 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | | ||| || ||||| | || ||||| || || || ||||| || Sbjct 611557 ATACCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGGATGTTATAATCG 611616 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | |||||||| | |||||| || || || || | ||||| ||||| || Sbjct 611617 GAAAGTGTGCGTCCGTCTTCCAATTGTTTGCCGGCGAAGATCAATCTCTGCTGATCTGGC 611676 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||||||||| || || ||||| || | || || || || Sbjct 611677 GGAATACCTTCTTTATCCTGAATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCA 611736 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || || || || || || || ||||| Sbjct 611737 ACTTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611786 >seq139 Length=3030711 Score = 145 bits (160), Expect = 2e-29 Identities = 172/229 (75%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 ||||||| |||||||| || || | || | || ||||| | |||||||||||||| | Sbjct 1044746 CTTTCTGGATATTATAATCTGACAAGGTACGTCCATCTTCCAACTGTTTTCCAGCAAATA 1044687 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | || | ||||||||||| || |||||||||||||||||||| || || || ||||||| Sbjct 1044686 TAAGTCGTTGTTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTT 1044627 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | || || | |||||| || || || || || ||||| || | || || |||| Sbjct 1044626 CAATAGTGTCTGATGCTTCTACTTCAAGGGTGATGGTTTTACCTGTCAAAGTCTTCACAA 1044567 Query 104550 ATATCTGCATTTTGTGTACAGTATTTATTAGAGTAATAATTATT-TATT 104597 ||||||||||| || || |||| || | || ||||| |||| |||| Sbjct 1044566 ATATCTGCATTGTG-GT---GTATCTA--AAAGAAATAAATATTATATT 1044524 >seq2840 Length=3276 Score = 116 bits (128), Expect = 9e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||||| | ||| || | ||||||||||||||| |||||||||||||| ||||| Sbjct 3087 TCCGCCTCTTAAACGAAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCAGA 3146 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 | |||||| || ||||| | ||||||||||||||| || | || || ||||| || || Sbjct 3147 CAAAGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGTGG 3206 Query 104452 TATTCCT 104458 || ||| Sbjct 3207 AATCCCT 3213 >seq26 Length=4553502 Score = 116 bits (128), Expect = 9e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||||| | ||| || | ||||||||||||||| |||||||||||||| ||||| Sbjct 253247 TCCGCCTCTTAAACGAAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCAGA 253188 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 | |||||| || ||||| | ||||||||||||||| || | || || ||||| || || Sbjct 253187 CAAAGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGTGG 253128 Query 104452 TATTCCT 104458 || ||| Sbjct 253127 AATCCCT 253121 Score = 116 bits (128), Expect = 9e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||||| | ||| || | ||||||||||||||| |||||||||||||| ||||| Sbjct 264827 TCCGCCTCTTAAACGAAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCAGA 264886 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 | |||||| || ||||| | ||||||||||||||| || | || || ||||| || || Sbjct 264887 CAAAGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGTGG 264946 Query 104452 TATTCCT 104458 || ||| Sbjct 264947 AATCCCT 264953 >seq25 Length=3544016 Score = 100 bits (110), Expect = 7e-16 Identities = 125/169 (74%), Gaps = 7/169 (4%) Strand=Plus/Minus Query 269069 TGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT---AGCGCGCCTTAC 269125 ||||| | ||||||| || | ||||| | || ||||||||| || || || | | | Sbjct 2907890 TGTGTTACAAAAAAAGCTCAGTGGGCATTAAATTGGATAAACCATGAAAGTGCCACGTTC 2907831 Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTC--TTTTG 269183 ||| | ||||||| ||||| || || |||||||||| ||||| | | | ||||| Sbjct 2907830 CCTGAACGTGTAGTTGCATTTGCTGCAGTGGAAGGTATAT--TTTTCAGCGGCAGTTTTG 2907773 Query 269184 CCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232 | ||||| || |||||||| |||||||| |||||||| ||| | || || Sbjct 2907772 CTGCTATTTTCTGGTTGAAAAAAAGAGGTCTTATGCCGGGACTTACATT 2907724 Score = 96.9 bits (106), Expect = 8e-15 Identities = 159/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 268808 GATTGGAAAAATTTAAA-ACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTT 268866 || ||||| | |||||| | || |||| | | ||||||||||| | | || || || Sbjct 2908242 GACTGGAATAGTTTAAATAACA-AAGAGAAACATTTTATATCTTACGTCTTAGCATTCTT 2908184 Query 268867 TGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACA 268926 ||| | | |||||| || || || || ||||| || || || ||||||| ||||| Sbjct 2908183 TGCCGCTTCTGATGGAATTGTCAATGAGAATCTCGTCGAACGATTTAGTCAAGAAGTACA 2908124 Query 268927 GATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGA 268986 || | ||||| | || || || || || || || || || |||||| | || ||||| Sbjct 2908123 AATAACAGAAGCACGTTGCTTCTATGGCTTTCAAATCGCCATGGAAAATGTACACTCAGA 2908064 Query 268987 GATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033 ||||| | ||||||| ||||| ||||| | ||| ||| |||| Sbjct 2908063 AATGTATTCTTTATTAATTGATACATATATCGCAGATGCCAAAGAAA 2908017 >seq41 Length=2258467 Score = 87.8 bits (96), Expect = 4e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 238527 AATGATAGAAGAAAATATATTTACTCTTTAAAACAGCTCGAGAGAGCCGAAACTCACGAT 238586 || |||| | |||||||| | || ||||||| || | || | ||||||||||| Sbjct 2054719 AAAGATAAACGAAAATATGTATATTCTTTAAGTCAATTAGAAAATTTTAAAACTCACGAT 2054778 Query 238587 CCCCTATGGAATTCCGCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTA 238646 ||||||||| | || | |||||||||| | || || |||||| | || ||| Sbjct 2054779 GATCTATGGAATGCATGTCAAAATCAAATGGTAATGATTGGAAAGATGCATGGATTTTTA 2054838 Query 238647 CGAATGTATTGGGCTAAAAAGATACTTGAATGGACT 238682 ||||||||||||| ||||| ||| | ||||||||| Sbjct 2054839 AGAATGTATTGGGCAAAAAAAATATTAGAATGGACT 2054874 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 238764 GTAGGTTGTATGTGGTCAATATGTGGATTACACGATAGGGCATGGTCTGAGAGACCTATA 238823 |||||||| |||||||| || ||||| | || ||| | ||||| || ||| |||| Sbjct 2055031 GTAGGTTGCATGTGGTCTATTTGTGGTGTCCATGATCATGGTTGGTCAGAAAGAGATATA 2055090 Query 238824 TTTGGAAAAGTTAGATACATGAATTATGAAGGAACTAAGAAAAAATTTGATGT 238876 ||||| ||| | ||||||||||||||||| ||| ||| ||||||| |||| Sbjct 2055091 TTTGGGAAAATAAGATACATGAATTATGAGGGATGTAAACGAAAATTTAATGT 2055143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151356119931128