Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq190 98.7 8e-16 >seq190 Length=691288 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | || ||||| ||||| || || |||||| ||||||||||| || | Sbjct 260296 CCTCCTCGAAGTCTCAACACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCCGAA 260237 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | | ||||| | || ||||| || | |||||||| ||||| || || Sbjct 260236 AGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAAGATTAAACGTTGCTGGTCAGGAGGA 260177 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||| ||||| ||||||| ||| | | | |||| || || | || ||| | Sbjct 260176 ATTCCTTCTTTGTCTTGAATTTTCGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTACC 260117 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 260116 TCGAGAGTAATAGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCAT 260070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421236485958866