Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq89 86.0 2e-13 seq77 80.6 7e-12 >seq89 Length=1225294 Score = 86.0 bits (94), Expect = 2e-13 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 3366 ATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCAT 3425 ||| || || || |||| |||| |||| || || | | || | ||| | |||||| | Sbjct 782754 ATGCACCTTCCATAAATTCGGTGCTTCTGGAACCATTCAGAAATTCGACGCCCTCTGCGT 782695 Query 3426 CCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGT 3485 ||| | |||| | ||||||||||||||||||| |||||||||||||||||| | | Sbjct 782694 CCTGGCCCTGAACATTCTCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTCATCAT 782635 Query 3486 GCTAGCC 3492 |||||| Sbjct 782634 TCTAGCC 782628 >seq77 Length=2260038 Score = 80.6 bits (88), Expect = 7e-12 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 ||||| || |||||||| ||| | || ||| | || | || | ||| || |||||| | Sbjct 986828 TGTACCTTCCACAAATATGGTGCGTCTGGCACGGTGCAGAAATTCGACGGTCTCTGCGTG 986769 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 || || ||| | |||||||||||||| ||| | ||||| |||||||||||| Sbjct 986768 CTACCATTAAACATCGTCAACGAGAAGATATACGTGTTCCTGTGGTTCTGGTTC 986715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479608791000