Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq155 95.1 3e-14 >seq155 Length=3151304 Score = 95.1 bits (104), Expect = 3e-14 Identities = 186/270 (69%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 297435 TTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAA-TCTCGAACCGAAC 297493 |||||||||| || || | ||| || |||||| || || ||||| ||| | ||| || Sbjct 3004391 TTGTGAAAATGTAACGAGGACTTGCTGCATCCTTTCCTCC-TGCAAGTCTTGTACCAAAT 3004333 Query 297494 TGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTC 297553 || || ||| | | || || ||||| ||||| || ||| |||||||| || Sbjct 3004332 TGACCAATCGGTTGAAGTAAATTTATATTATTACTTCCAACGAAATTTTGTGCAAGATTA 3004273 Query 297554 ACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 | ||| || ||||| |||| ||||||||||| || ||| || || || || Sbjct 3004272 ATGATTGTTGACATAAGAGAGACTTCACCATGGTGATATGCAGAATGTTCAGCTACAGAA 3004213 Query 297614 CC-GCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATAT 297672 || ||| || |||||||| || || || | | ||| || || ||| || ||||| Sbjct 3004212 CCAGCT-AATTGTGCAACTTTTACTTCACGCTTATCATTACGTTTCAAACATGTATATAC 3004154 Query 297673 CACTTTCCGTTGAGAAGGTTTGAAACCATC 297702 |||||||| ||| |||||| |||||||| Sbjct 3004153 CACTTTCCTTTGTCCAGGTTTAAAACCATC 3004124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102839501557100