Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq52 86.0 5e-12 seq135 84.2 2e-11 >seq52 Length=1900291 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 108840 CAAGAACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATG 108899 || ||| || | ||| | || |||||| | |||||| | | ||||||||||||| Sbjct 1752305 CAGGAATATCTGCCCGACTGAGAACAAAATTGTGGCGATACTTTCGGTCGGCGAGGGATG 1752246 Query 108900 GCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAAC 108954 |||||| |||||||| |||||||| | |||||||| |||||||| || || ||| Sbjct 1752245 GCACAATTACCACCATGTGTTCCCGTGGGACTACAAAGCCGCCGAATTCGGCAAC 1752191 >seq135 Length=2039897 Score = 84.2 bits (92), Expect = 2e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946 ||||||||||||||||||| |||||||| |||||||| | |||||||| |||||||| | Sbjct 1112646 TCGGCGAGGGATGGCACAATTACCACCATGTGTTCCCGTGGGACTACAAAGCCGCCGAAT 1112705 Query 108947 TGGGGAACGAC 108957 | || ||| || Sbjct 1112706 TCGGCAACTAC 1112716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381759464914704