Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq78 405 4e-107 seq21 187 2e-41 seq183 131 1e-24 seq67 123 2e-22 seq27 120 2e-21 seq213 109 4e-18 seq193 102 6e-16 seq55 87.8 1e-11 >seq78 Length=788090 Score = 405 bits (448), Expect = 4e-107 Identities = 937/1389 (67%), Gaps = 30/1389 (2%) Strand=Plus/Minus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 |||||| | | |||||||||||| | |||| | || | || || ||| ||||| Sbjct 410441 AGCTTCATTGACCATTCTCTCAATATCTTCTTTACTGAGACGGCCTTTATCATTGGTAAT 410382 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 |||||| || || ||| || |||||||| | || | || || ||||||||||| Sbjct 410381 AGTAATTTTGTTCTCCTTGCCAGTAGATTTATCCACTGCCGAAACGTTTAGAATACCATT 410322 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 |||||| | ||| || ||||||||||| ||||| || || | |||| ||||| || || Sbjct 410321 GGCATCAATATCGAAGGTGACTTCAATCTGAGGAACTCCACGAGGAGCTGGTGGAATACC 410262 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 | | |||| | |||| || ||||| ||||| | ||||| || ||| | Sbjct 410261 ACTGAGCTCAAATTTACCCAACAAGTTGTTATCCTTAGTCATCGCACGTTCTCCTTCGTA 410202 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTT 517460 | ||| || ||| | | ||||||||| | ||| || || || | |||| | || || Sbjct 410201 GACTTGAATCAATACTCCTGGTTGATTATCAGCATACGTAGTGAA-AGTCTGAGTTTGTT 410143 Query 517461 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | ||||| || |||||||| | || | ||||||| ||||| || ||||| | Sbjct 410142 TGGTTGGAATAGTAGTGTTTCTTTTGATGAGGGCCGTCATAACGCCACCAGCAGTTTCAA 410083 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA--TTTTGAAGTTTTTCATCAGT 517578 |||||||| | ||| || ||||||| || ||||| | ||| | || |||| | Sbjct 410082 TTCCAAGAGACAAAGGTGTTACATCAAGAAG--CAATAAGTCTTGTACTTCTTCAGACTT 410025 Query 517579 TTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATT 517638 | ||| |||||||| ||||| | |||||| ||||| || ||||||||||| ||||| Sbjct 410024 GTCGCCATGTAGAATAGCGGCTTGTACAGCAGCTCCATAAGCTACAGCTTCATCGGGATT 409965 Query 517639 AACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAG 517697 | || || ||| | || || || ||||| |||| ||| || || || | | ||||| Sbjct 409964 GATAGATTTATTCAATTCCTTCCCGTTGAAGAAATCTTGCAACAA-TTTTTGGATCTTAG 409906 Query 517698 GAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTG 517757 ||||||| | ||||| ||||| | || || || || | ||| | |||||||| ||| | Sbjct 409905 GAATACGTGTAGATCCACCAACCAGAACGATATCGTGAATCTGAGCTTTATCCATTTTAG 409846 Query 517758 AATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTT 517817 || || ||||| || || || || |||| || | || | ||| || | Sbjct 409845 CGTCACGCAACGACTTTTCCACTGGCTCCAGTGTTCCTCTGAAGAGATCAGCACAGAGCT 409786 Query 517818 CTTCGAATTTAGCTCTAGTAAGAGTGACATTAT---AATCAATTCCTTCGAACAAAGAAT 517874 |||||||| |||||| || || ||| | ||| |||||||||| || | | |||| Sbjct 409785 CTTCGAATCGAGCTCTGGT--GATTGA-AGTATAGAAATCAATTCCCTCATAGAGTGAAT 409729 Query 517875 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 517934 ||| ||| || ||| |||||| || ||||| | | |||||| ||||| || || |||| Sbjct 409728 CAATTTCGATACTAGCTTGAGTAGACGAAGACAAAGTACGTTTCGCACGCTCGCAGGCTG 409669 Query 517935 TCCTTAGTCTTCGTA-AG-GCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTT 517992 | || | | || | || || |||| | | | ||| ||| | ||||| || | ||| Sbjct 409668 TTCTCAAACGGCGGAGAGCGCGTTTGTT--TGCAGTCAGGTCTTTCTTATACTTCCGCTT 409611 Query 517993 GAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTA 518050 ||| || | |||| | ||| | || | |||||| || |||||||| || || | | | Sbjct 409610 GAATTCCTGAACAAA--ATGATTGACCATACGATTGTCGAAATCTTCGCCGCCAAGATGA 409553 Query 518051 GTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACA 518110 |||| ||||| || | | | || | ||||| |||||||| | | ||||| | ||| Sbjct 409552 GTATCTCCTGCTGTTGATTTAACCTCGAAAATGCCATCTTCGATGGTCAAAATTGAGACA 409493 Query 518111 TCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT--T 518168 || ||| |||||||| | |||||||| || || || ||| || | |||| | Sbjct 409492 TCGAAGGTGCCACCACCAAGGTCAAAAATTAGGACGTTGCGTTC--GCTCGTAGTTTTCT 409435 Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 | || | |||||||||| || |||||||| || || || || || | |||||||| | Sbjct 409434 TGTCCAAGCCATACGCAATGGCGGCAGCAGTGGGCTCGTTGATGATACGTAAAACATTCA 409375 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 ||| | || | || || || || || || || | || || ||||| || || |||| Sbjct 409374 AACCCGAGATAGTACCAGCGTCCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCAG 409315 Query 518289 GAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 | ||||| || ||||||| | || || || | ||| || || |||| |||| Sbjct 409314 GCACAGTGATCACGGCATTGCTGACAGTCTTGCCGAGATATGCCTCAGCAGTTTCCTTCA 409255 Query 518349 T-TTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGA 518407 | ||||| || | |||||| | || ||| ||| | | ||| | || || Sbjct 409254 TCTTTAC-CAAGACCATTGAACTCACTTCTTCAGGGAAGAAAGTCTTCGCCTCTCCTTTG 409196 Query 518408 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTC 518467 || |||||| || | || || |||| | || | ||| | || ||||| | |||| Sbjct 409195 TAGTATACTTGAATTTTAGGCTTGCCACCATCGTTTACAACAGTGAAGGGCCAATGTTTC 409136 Query 518468 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATC-AAA 518526 ||||| | |||||| | | || | |||| | ||||||| || || ||||| ||| Sbjct 409135 ATATCAGCCTGAACAGTGGGATCCTCAAAACGACGTCCAATTAGCCGCTTGGCATCTAAA 409076 Query 518527 AATAGTATT 518535 |||| |||| Sbjct 409075 AATA-TATT 409068 Score = 120 bits (132), Expect = 2e-21 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||||||| ||| | ||||| || ||| |||||| |||||| ||||| || || | Sbjct 406690 CAAAAATAGTGTTGTTGGGATTCATGGCAACTTGATTTTTGGCAGCATCGCCGATTAACC 406631 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 |||| || || || |||| || || || ||||| ||||| ||||||||||| || | Sbjct 406630 GTTCAGTTTCGGTGAATGCGACGTAACTAGGTGTTGTACGATTTCCTTGATCATTGGCGA 406571 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | ||||| ||||| || | ||| ||||||| || || |||| || || | ||||| Sbjct 406570 TGATTTCCACTTTCCCGTGTTGGAATACACCGACGCAGGAGTAAGTGGTGCCGAGATCAA 406511 Query 518703 TACCAA 518708 |||||| Sbjct 406510 TACCAA 406505 >seq21 Length=3094869 Score = 187 bits (206), Expect = 2e-41 Identities = 399/583 (68%), Gaps = 20/583 (3%) Strand=Plus/Minus Query 517811 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACA 517868 ||||||||||||||| | ||||| || || || | || || ||||| || ||||| | Sbjct 1898171 CAAAGTTCTTCGAATCTGGCTCTGGT--GATCGATGTGTAGAAATCAATGCCCTCGAAAA 1898114 Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 517928 |||||| | ||| || | | ||| || || ||| | || | ||||| | ||| | Sbjct 1898113 GAGAATCTATTTCGATACTGGCTTGCGTTGACGAACTCAATGTTCTCTTAGCCCTTTCGC 1898054 Query 517929 ATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATT-GAT-TCAAATCTGTTTTATATT 517985 |||| || || |||| | |||| || | || ||| || | || || | || |||| Sbjct 1898053 ATGCGGTTCTCAGTCGCC-TAAGTGCCCT--CTTATTCGAGCTTAAGTCCTTCTTGTATT 1897997 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 518045 | |||||||| || | ||| | |||| | ||||| || || |||||||| || | Sbjct 1897996 TCCTCTTGAACTCCTGAACGAAGTGATTTACCATTCGATTGTCGAAGTCTTCACCACCGA 1897937 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | ||| | |||| ||| | | | |||| || | |||||||||| || ||||| | Sbjct 1897936 GGTGAGTGTCGCCTGCCGTCGATTTGACTTCAAAGATGCCATCTTCAATAGTCAAAATGG 1897877 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG- 518164 ||||| ||| ||||| |||| |||||||| | ||| ||| | ||| | || Sbjct 1897876 AGACATCGAAGGTGCCACCTCCCAAGTCAAAAATCAATACGTTCTTCTCT----CCTGAA 1897821 Query 518165 ---TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 518221 |||||||| | |||||| || | || || || ||||| || || || ||||||||| Sbjct 1897820 GACTTTTTATCTAAACCATAAGCTATCGCCGCCGCGGTTGGCTCGTTGATTATTCTCAAA 1897761 Query 518222 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 518281 || || | || | ||| ||| |||||||| ||||||||||| || || || || || Sbjct 1897760 ACGTTTAAGCCTGATATTGCTCCCGCATCTTTGGTGGCTTGTCTCTGAGAGTCATTGAAG 1897701 Query 518282 TATGCAGGAACAGTAATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCGT 518340 ||||| ||||| || || || || | || || ||||| || | ||| || ||| || Sbjct 1897700 TATGCGGGAACGGTGATGACAGCGTTGGTGACAGTCTTT-CCTAAATACGCCTCTGCTGT 1897642 Query 518341 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 || |||||| || | | | ||| || || | || ||| ||| Sbjct 1897641 TTCTTTCATCTTCGTAAGTACCATCGAAGATACTTCTTCAGGG 1897599 Score = 170 bits (188), Expect = 1e-36 Identities = 277/394 (70%), Gaps = 6/394 (2%) Strand=Plus/Minus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 |||||||| ||| |||||| || || ||||||||||| ||||| | ||||||||||||| Sbjct 1898739 GTTGATTTCTCAACGGCAGAGACGTTCAGAATACCATTAGCATCGATATCAAATGTGACT 1898680 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 || || ||||| || ||||| | |||||||| || || | | ||| | || ||| Sbjct 1898679 TCGATCTGAGGTACGCCTCTAGGCGCAGGTGGAATGCCAGTAAGCTCGAATTTCCCGAGA 1898620 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 | ||||| ||||| || | || ||| || ||| | | |||||| ||| ||| | Sbjct 1898619 ATGTTATTGTCTTTGGTCATAGCTCTTTCTCCTTCGTATACTTGGATCAAAACACCAGGT 1898560 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTA 517483 ||||| || ||||| || ||||| | | || || || || |||||||| | Sbjct 1898559 TGATTGTCCGAATATGTGGTAAAGGTTTGAGTTTGCTTGGTCGGTATCGTTGTGTTCCGT 1898500 Query 517484 TCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACA 517543 | || | | | ||||| | ||||| |||||||||| ||| ||||| || || ||||| Sbjct 1898499 TTGATCAAAGTTGTCATCACGCCACCAGCTGTTTCTATACCCAGAGACAGTGGCGTGACG 1898440 Query 517544 TCAACTAGGACAATA--TTTTGAAGTTTTTCATCAGTTTGACC-AACAAGAATAGCTGCT 517600 || | || ||| || | ||| | || |||| | | ||| |||| ||||| || Sbjct 1898439 TCCAGTA--ACAGTAAGTCTTGGACTTCTTCAGACTTGTCACCGTGCAAG-ATAGCAGCC 1898383 Query 517601 TGAATAGCAGCACCATATGCAACAGCTTCATCAG 517634 || | ||| |||||||| || |||||||| |||| Sbjct 1898382 TGTACAGCTGCACCATAGGCGACAGCTTCGTCAG 1898349 Score = 89.7 bits (98), Expect = 4e-12 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584 ||||| || ||| | || || || || | || | |||||| || || || ||||| | Sbjct 1896469 AAAATGGTGTTGTTCGGGTTCATCGCGACCTGGTTTTTGGCCGCGTCGCCGATCAGTCTT 1896410 Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644 ||||| || || || | ||||| || || || ||||| ||||||||||| ||||| Sbjct 1896409 TCTGTGTCCGTGAAGGCGACATAACTCGGTGTCGTTCGATTTCCTTGATCATTTGCAATG 1896350 Query 518645 ATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATA 518704 || || ||||| |||| ||| | ||||| || || | | || || || || ||||| Sbjct 1896349 ATCTCGACTTTTCCATGTTGGAAAACACCGACGCAGGAATACGTGGTGCCCAAGTCAATT 1896290 Query 518705 CCAA 518708 |||| Sbjct 1896289 CCAA 1896286 >seq183 Length=820931 Score = 131 bits (144), Expect = 1e-24 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 870794 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 870853 ||| | ||||| |||| |||| ||| ||||||||||||||||||||| ||||||||||| Sbjct 315723 AAAGTGATTGTAGATTTTTCTAGTCCTAATATTGCTAAAGAAATGCATGTTGGACATTTA 315664 Query 870854 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 870913 ||||| ||||| ||||| || |||| || | |||| | || || ||||| Sbjct 315663 AGATCTACTATAATTGGAGACAGTATTGCAAGATTGCTAGAGTTTCTAGGGCATGATGTG 315604 Query 870914 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 870973 | | || ||||| || ||||||||||| || ||||| || |||||||| ||| || || Sbjct 315603 TTAAGGATAAATCACGTTGGTGATTGGGGTACCCAATTTGGAATGTTAATAGCTCATCTT 315544 Query 870974 AAAAATA 870980 || ||| Sbjct 315543 CAAGATA 315537 >seq67 Length=1923671 Score = 123 bits (136), Expect = 2e-22 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| |||| |||| || | || || |||| ||||| || |||||||||||||| | Sbjct 1406360 TTTATCTTCTGTTTTGTCCATGCCGTATGCAAGGGCAGCTGCTGTTGGTTCATTAATTAC 1406301 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 ||| | |||||||| |||| |||| || ||||| || || || |||||||||||||| Sbjct 1406300 TCTAAGTACATTAAGTCCAGAAATTTGACCAGCATCCTTGGTAGCCTGTCTTTGTGAATC 1406241 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCT 518334 || || ||||||||||||||||| || |||| ||||| | ||| | ||| | Sbjct 1406240 ATTGAAGTATGCAGGAACAGTAATTACAGCATTTTTTACTGATGTACTTAAATATGATTC 1406181 Query 518335 TGCCGTTTGTTTCATTTT 518352 ||| |||| ||||| || Sbjct 1406180 TGCTGTTTCCTTCATCTT 1406163 Score = 98.7 bits (108), Expect = 8e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 ||||||||||| || ||||| |||||||||||||||| | |||| |||| | || | | Sbjct 1406338 CCGTATGCAAGGGCAGCTGCTGTTGGTTCATTAATTACTCTAAGTACATTAAGTCCAGAA 1406279 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 |||| | ||| ||| || || ||||| |||| ||||| || ||||| || |||||| Sbjct 1406278 ATTTGACCAGCATCCTTGGTAGCCTGTCTTTGTGAATCATTGAAGTATGCAGGAACAGTA 1406219 Query 322364 ATAACTGCTTTATT 322377 || || || || || Sbjct 1406218 ATTACAGCATTTTT 1406205 >seq27 Length=464375 Score = 120 bits (132), Expect = 2e-21 Identities = 171/240 (71%), Gaps = 3/240 (1%) Strand=Plus/Plus Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| | |||||| ||||| || ||||| | ||| | || || || |||| || Sbjct 135571 ACGTTGATCAAAGTCTTCGCCACCCAAATGAGTGTCACCGTTTGTTGCCACAACTTCAAA 135630 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | ||||| |||| | | | | | |||||| ||| |||||||||| |||||| | Sbjct 135631 CACTCCATTATCAATTGTAAGCAAACTGACATCAAAGGTACCACCACCCAAATCAAAGAC 135690 Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 | ||||| |||| |||| ||||||| | |||||| |||| |||||||| || Sbjct 135691 TAACACATTTTTTTCCCCATCTT---TTTTATCCAAACCATAAGCAATTGCAGCAGCTGT 135747 Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 |||||||| || ||||||| |||| |||| |||| ||| | |||||||||||||| || Sbjct 135748 AGGTTCATTGATGATTCTCATAACAATAAGTCCAGAAATAGTGCCTGCATCTTTAGTAGC 135807 >seq213 Length=960599 Score = 109 bits (120), Expect = 4e-18 Identities = 119/153 (78%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT-TA 367058 || |||||||||||||| ||||||||| ||||||| |||| || |||| |||||| | Sbjct 611349 GCAACAATAGCATTTGGAATGGGTATTGATAAACCAAATGTGCGATTTGTAATTCATGCA 611408 Query 367059 TGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGATGG 367118 | | ||| || |||||||||||| |||||||||| ||| | || || |||||||| Sbjct 611409 TCTA-TTCCGAAATCTATTGAAGGTTACTATCAAGAAAGTGGGCGCGCTGGACGTGATGG 611467 Query 367119 AGAAAAATCTTATTGT-TATGCATTTTATAATT 367150 ||| || | ||||| ||| ||||||||||| Sbjct 611468 AGATAATGCAGATTGTATAT-TATTTTATAATT 611499 >seq193 Length=3296626 Score = 102 bits (112), Expect = 6e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 668846 AGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATG 668905 || || | ||| || ||||| | || ||||||||||| ||||| |||||||| || | Sbjct 2756023 AGGTTGAAAGGAAAGGAAGGCAGAATAAGAGGAAATTTAATGGGCAAACGTGTTGACTTC 2755964 Query 668906 TCTGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCT 668965 ||||| ||||| ||||||||| ||||||| ||| | || || | |||||||| ||| Sbjct 2755963 TCTGCTCGTACTGTTATTACTCCTGATCCTAATTTACGGATCGATCAGGTTGGTGTACCT 2755904 Query 668966 CTTATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006 | | |||||| | ||| | || || ||||||||||| Sbjct 2755903 CGGAGTATTGCACAGAATTTAACATTCCCGGAAATTGTAAC 2755863 >seq55 Length=1320864 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/111 (78%), Gaps = 4/111 (4%) Strand=Plus/Plus Query 200573 TTCATTATAATGATGAGGAAATTTCAAATCGATTCCACCAAAATGAATATCAATACTATT 200632 |||||||| |||||||||||| || ||||| ||||| ||| ||||||||| | ||| | Sbjct 947954 TTCATTATCATGATGAGGAAACTTTAAATCTATTCCTCCAGTATGAATATCTAAACTTTC 948013 Query 200633 TCCTAATGTTTTCTTGAT--CATGGCTGAACATTCAATATGCCAACCAGGT 200681 ||| | || | ||| |||| |||||||||| ||||||||||| ||| Sbjct 948014 TCC--ACAAATTATAGATGCCATGACTGAACATTCTATATGCCAACCTGGT 948062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780680179639396