Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq64 82.4 9e-11 >seq64 Length=2955609 Score = 82.4 bits (90), Expect = 9e-11 Identities = 178/262 (68%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 110695 AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC- 110753 || || ||||| || | |||||| | ||||||||||| | ||| | ||| | | ||| Sbjct 1696645 AGATCTAAAAATTCAAAGATATCTGCATGCCATGGTTCCAAATATATAGCAAATGCTCCT 1696586 Query 110754 ---CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCAT 110810 ||| | || | || | |||||| || |||||| |||| | || |||| ||| Sbjct 1696585 GGTCTTTT-ATTTCCTCCTTGATCAACATACCGAGCTGTGTTATTGTATACTCTGATCAT 1696527 Query 110811 AGGAATAATTCCATCGGATTGACCATTTGTACCC-CTAATTCTGGACTTATTGGCACGAA 110869 ||||| | |||| ||| |||| |||||| ||| | || || | ||| | |||| Sbjct 1696526 TGGAATTAAACCATTAGATACACCAAGTGTACCAGCTATTGGTGTACCTTTTG-CTCGAA 1696468 Query 110870 TGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGA 110929 | || | || | ||||||||||| || | |||||||| ||||||| | | | Sbjct 1696467 TACAATGTACATTAAGTCCAATACCACCAGCTGATTTACTAATAAGTGCACATCTTTTTA 1696408 Query 110930 GTGTACCATAAATACCATCAAT 110951 |||| ||||||| || ||||| Sbjct 1696407 ATGTATCATAAATTCCTTCAAT 1696386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588954899934800