Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq218 91.5 2e-13 >seq218 Length=400417 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953 || ||| | ||||| || || || | || ||||||||||||||||| || || ||||| Sbjct 239310 GCGTACCGCTTAGCTCTTCAAACACGTGAACAGCATATCAGGAGAGATAAGGCTACCAGC 239251 Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCAT 154013 ||||| || || || || ||| ||||||| || ||||||| | | ||||| | ||||| Sbjct 239250 AACATTTGTACCGCACAAGCATTGCTGGCAAACATGTCTGCAATGTATGCCGTGTATCAC 239191 Query 154014 GGTGCAGATGGACTA 154028 || | || ||| || Sbjct 239190 GGGCCTGAGGGAATA 239176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579192049701440