Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq218 93.3 5e-14 >seq218 Length=400417 Score = 93.3 bits (102), Expect = 5e-14 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || | ||||| || ||||| || || || || || || || || ||| Sbjct 237709 ACTCCAATAGGTCCCATTCCAGGTCCACCACCGCCGTGAGGTATGCAAAACGTTTTGTGT 237768 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| ||||| | || || ||||| |||| || |||||| || || ||| Sbjct 237769 AAATTCAGATGTGAAACGTCGCTGCCATAATCACCAGGACGACATAGACCAACTTGGGCA 237828 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || || || | ||| |||||||||||| |||||||| || ||| || Sbjct 237829 TTCATATTAGCCCCGTCTAAATACACCTGACCACCAACTTCATGAACCATAGCACAAATA 237888 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | ||| | ||||| || || | || |||||||| || ||||| | ||| || Sbjct 237889 TCAGCGATAGTCTCCTCAAACACGCCGTTCGTTGATGGATACGTTATCATCAAACAAGA 237947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578977657382320