Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 105 8e-17 >seq2 Length=662964 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||||||| ||| || || | ||||| || |||||||| || | || Sbjct 411043 GCTTGGCCAATTCGCCGGGCAAGAGAAGCCTTACGGCAGTTTGGATCTCTCGAGAAGTGA 410984 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| || ||||| |||| || | | ||||||| | |||| || |||| | Sbjct 410983 TCGTGGAACGTTTGTTATAGTGTGCTAATCTTGATGCCTCGGCGGCGATACGCTCGAAAA 410924 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||| |||||||| ||||| ||| |||||||||| ||| || | Sbjct 410923 CATCGTTGACAAAGCTGTTCATGATACTCATCGCTTTGCTGGAGATGCCGGTGTCAGGAT 410864 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| || ||||| ||||| ||| Sbjct 410863 GCACCTGTTTCAGCACTTTGTAAATG 410838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106904002618522