Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq155 96.9 4e-15 >seq155 Length=3151304 Score = 96.9 bits (106), Expect = 4e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 165953 AAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAACAA 166012 || ||||| |||||| ||| | ||| || ||||| | | ||| | ||||||||| Sbjct 3004193 AAAGTTGCACAATTAGCTGGTTCTGTAGCTGAACATTCTGCATATCACCATGGTGAAGTC 3004252 Query 166013 AAT-TTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGC 166071 | |||||| || | || ||||| |||| ||| |||| ||||| | ||||||||| Sbjct 3004253 TCTCTTATGTCAA-CAATCATTAATCTTGCACAAAATTTCGTTGGAAGTAATAATATAAA 3004311 Query 166072 ATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGAT 166123 |||||| |||| ||||||||||||||| ||| | | |||||| || ||| Sbjct 3004312 TTTACTTCAACCGATTGGTCAATTTGGTACAAGACTTGCAGGAGGAAAGGAT 3004363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632466941060080