Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 132 8e-25 >seq2 Length=662964 Score = 132 bits (146), Expect = 8e-25 Identities = 175/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||| || || || ||||| || || |||||| |||||| ||||||| ||| Sbjct 411082 TGTATTTGGTAACTGCTTTAGTACCTTCGCTTACTGCGTGCTTGGCCAATTCGCCGGGCA 411023 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || | ||||| || |||||||| || | ||||||| || |||||| | Sbjct 411022 AGAGAAGCCTTACGGCAGTTTGGATCTCTCGAGAAGTGATCGTGGAACGTTTGTTATAGT 410963 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || | | ||||||| | |||| || |||| | ||||||||||| ||||| Sbjct 410962 GTGCTAATCTTGATGCCTCGGCGGCGATACGCTCGAAAACATCGTTGACAAAGCTGTTCA 410903 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| |||| |||||||||| ||| || |||||||| || ||||| |||| Sbjct 410902 TGATACTCATCGCTTTGCTGGAGATGCCGGTGTCAGGATGCACCTGTTTCAGCACTTTGT 410843 Query 1485710 AAA 1485712 ||| Sbjct 410842 AAA 410840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915941530508174