Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq65 122 6e-23 seq190 96.9 2e-15 >seq65 Length=2871674 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | || || || || | || ||||| ||||| ||||| || || Sbjct 611788 CCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGAATATTATAATCGGAA 611847 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| |||| |||||| ||||| ||||||| || |||||| ||| | || Sbjct 611848 AGTGTGCGTCCATCTTCCAATTGCTTGCCGGCAAAGATCAATCTTTGCTGATCTGGTGGA 611907 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | |||||| |||||| | | || | ||| || || || Sbjct 611908 ATTCCCTCCTTGTCCTGAATTTTTGCTTTGACATTTTCAATGGTATCAGACGCTTCAACC 611967 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| || |||||||| || || || |||||||| || ||||| Sbjct 611968 TCCAAGGTAATAGTCTTTCCAGTAAGAGTTTTTACAAAAATTTGCAT 612014 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | ||| || || |||| ||| ||||| || |||||||| ||||| Sbjct 611104 CCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCCGAA 611163 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || ||||| ||||| || || |||| || |||||| ||| |||| Sbjct 611164 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGCGGA 611223 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||||| | Sbjct 611224 ATACCTTCTTTATCCTGAATCTTGGCCTTAAC--ATTCTCAATTGTGTCAGAAGCCTCAA 611281 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| ||| ||||| || || ||||||||||| || || || ||||| Sbjct 611282 CTTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611330 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | ||| || || |||| ||| ||||| || |||||||| ||||| Sbjct 611332 CCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCCGAA 611391 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || ||||| ||||| || || |||| || |||||| ||| |||| Sbjct 611392 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGCGGA 611451 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||||| | Sbjct 611452 ATACCTTCTTTATCCTGAATCTTGGCCTTAAC--ATTCTCAATTGTGTCAGAAGCCTCAA 611509 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| ||| ||||| || || ||||||||||| || || || ||||| Sbjct 611510 CTTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611558 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || || || ||||||||||| || || || |||| | || Sbjct 610663 AGTACAAGGTGAAGAGTCGATTCTTTTTGAATGTTATAATCAGAAAGTGTGCGTCCGTCT 610722 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || || ||||| |||| || ||||||||| | || | || |||||||| Sbjct 610723 TCCAATTGTTTGCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCC 610782 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | | || | ||| |||||| || |||| ||| || || Sbjct 610783 TGAATTTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCAACTTCAAGGGTAATAGTT 610842 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || || || ||||| Sbjct 610843 TTACCCGTGAGAGTCTTAACGAAAATTTGCAT 610874 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||||| || ||||| || || | || | || Sbjct 612031 AGTACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAGTCTGAAAGTGTACGTCCGTCT 612090 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| ||||||||||||| || |||||| ||| | || | || || || || Sbjct 612091 TCCAATTGCTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCTTCTTTATCT 612150 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | |||||| ||| ||| | | |||| || |||||| || || | || || || Sbjct 612151 TGGATTTTTGCTTTAACGTTTTCAATCGTATCTGAGGCCTCAACTTCGAGTGTAATTGTT 612210 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||| ||||| || || || |||||| Sbjct 612211 TTACCAGTGAGAGTCTTGACGAAAATTTGCATG 612243 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| ||||||||||| || || || | || | || || ||||||||||| || || Sbjct 612279 CTCCTTTTGAATGTTATAATCAGAAAGTGTACGTCCGTCTTCTAGTTGCTTTCCAGCAAA 612338 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || || |||||| | || | || |||||||| | |||||| ||| ||| Sbjct 612339 TATCAATCTCTGTTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTTGCTTTCACGTT 612398 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || || || || || | |||||| || || || || | ||||| || Sbjct 612399 TTCAATTGTATCTGATGCTTCAACCTCCAGGGTTATCGTTTTACCTGTCAATGTCTTGAC 612458 Query 34966 AAAGATCTGCATGAT 34980 |||||||||||||| Sbjct 612459 GAAGATCTGCATGAT 612473 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | || || || || | || ||||| || |||||||| || || Sbjct 611560 CCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGGATGTTATAATCGGAA 611619 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| | || |||| ||| || ||||||||||||| || ||||| ||| |||| Sbjct 611620 AGTGTGCGTCCGTCTTCCAATTGTTTGCCGGCGAAGATCAATCTCTGCTGATCTGGCGGA 611679 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || || || | || || || || || || || | ||| ||||| | Sbjct 611680 ATACCTTCTTTATCCTGAATCTTGGCCTTAAC--ATTCTCAATTGTGTCAGAAGCCTCAA 611737 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| ||| ||||| || || ||||||||||| || || || ||||| Sbjct 611738 CTTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611786 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| ||||| | || || || |||| ||| |||||| || || ||||| || | Sbjct 610874 TTCCTCCTCTCAAACGAAGAACAAGATGAAGGGTTGACTCCTTTTGGATATTATAATCAG 610933 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | | || ||||| || | ||| || ||||||||||||| | ||||| ||| | | Sbjct 610934 ACAATGTACGATCATCTTCTAATTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGTG 610993 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || || || || | || || || || || || || | ||| ||||| Sbjct 610994 GAATGCCTTCTTTATCTTGAATCTTGGCCTTAAC--ATTCTCAATTGTGTCAGAAGCCTC 611051 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||| ||| ||||| || || ||||||||||| || || || ||||| Sbjct 611052 AACCTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611102 >seq190 Length=691288 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||||||||| || || || | | | |||| || | ||| || || |||||| Sbjct 255941 TCTTTCTGAATGTTATAATCTGACAGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAAG 255882 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || | ||||||||||| | || | || || ||||| | ||||| ||| || | Sbjct 255881 ATTAAACGTTGCTGGTCAGGAGGAATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTT 255822 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| || || || || | ||| |||||||| || ||||| || || ||| Sbjct 255821 TCTATTGTGTCAGAAGCTTCTACTTCCAAGGTGATGGTCTTACCTGTGAGCGTTTTAACA 255762 Query 34967 AAGATCTGCAT 34977 || |||||||| Sbjct 255761 AAAATCTGCAT 255751 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| |||||||| || | | | |||| || | ||| || || ||||| Sbjct 260261 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAA 260202 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| | ||||||||||| | || | || || ||||| | ||||| || || Sbjct 260201 GATTAAACGTTGCTGGTCAGGAGGAATTCCTTCTTTGTCTTGAATTTTCGCCTTAACATT 260142 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 |||| | || ||||| || || | || || || ||||| ||||| || || || Sbjct 260141 CTCTATTGTGTCTGAAGCCTCTACCTCGAGAGTAATAGTTTTTCCTGTGAGTGTTTTGAC 260082 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 260081 AAAGATCTGCATG 260069 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || ||||||||||||||||| || || | | | |||| || | || || || || ||| Sbjct 255713 TCTTTCTGAATGTTATAGTCTGACAGAGTTCTCCCATCTTCTAACTGTTTACCAGCAAAG 255654 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || ||||||||| | || | ||||| ||||| | || ||| ||| ||| Sbjct 255653 ATCAAACGCTGCTGGTCTGGAGGAATTCCCTCTTTGTCTTGGATCTTTGTTTTCACGTTC 255594 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | || || || || || | ||| ||||| ||||| || | || || ||| Sbjct 255593 TCTATTGTGCCAGAAGCTTCTACTTCCAAGGTGATGGTTTTTCCTGTCAATGTTTTGACA 255534 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 255533 AAGATCTGCATG 255522 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || || |||||||| || || || || || | | |||| || Sbjct 255047 ACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAGAGAGTTCTTCCATCTTCT 254988 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||| || || || || |||| || ||||||||| | || | ||||| ||||| | Sbjct 254987 AATTGTTTACCAGCAAAAATCAAACGCTGCTGGTCTGGAGGAATTCCCTCTTTGTCTTGG 254928 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || ||| ||| || | |||| | ||| || || || |||| || || || ||| Sbjct 254927 ATCTTTGCTTTCACATTTTCTATTGTGTCAGAAGCTTCAACTTCAAGAGTAATAGTTTTT 254868 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGGA 34986 || || | |||||| |||||||||||||| || || || Sbjct 254867 CCTGTTAAGGTCTTAACAAAGATCTGCATAATTGTAGA 254830 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| ||||||||||| ||| | | | | | |||| || | |||||| || || ||| Sbjct 260716 TCCTTTTGAATGTTATAATCCAACAAAGTTCTCCCATCTTCTAATTGCTTCCCAGCAAAG 260657 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||||||||| | || | || |||||||| | ||||| || || | Sbjct 260656 ATCAAACGTTGCTGGTCAGGAGGAATTCCTTCCTTGTCTTGAATTTTCGCCTTAACATTT 260597 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || || || || | ||| ||||| || || ||||| || || || Sbjct 260596 TCGATTGTATCAGAAGCTTCTACTTCCAAGGTAATGGTTTTCCCTGTGAGTGTTTTGACG 260537 Query 34967 AAGATCTGCATG 34978 ||||| |||||| Sbjct 260536 AAGATTTGCATG 260525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325681423754054