Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq65 179 3e-40 seq190 172 4e-38 seq139 123 2e-23 seq2840 96.9 3e-15 seq26 96.9 3e-15 >seq65 Length=2871674 Score = 179 bits (198), Expect = 3e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||||||||| || | |||||| || ||||| ||||| ||||||||||||| | Sbjct 611104 CCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCCGAA 611163 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || |||||||| |||||| | ||||||||||||||||| |||||| Sbjct 611164 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGCGGA 611223 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||| || || ||| || | || ||| | || | ||||||||| || || Sbjct 611224 ATACCTTCTTTATCCTG-AATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCAAC 611282 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || ||||| || || | ||| || || || || ||||| Sbjct 611283 TTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611330 Score = 179 bits (198), Expect = 3e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||||||||| || | |||||| || ||||| ||||| ||||||||||||| | Sbjct 611332 CCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCCGAA 611391 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || |||||||| |||||| | ||||||||||||||||| |||||| Sbjct 611392 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGCGGA 611451 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||| || || ||| || | || ||| | || | ||||||||| || || Sbjct 611452 ATACCTTCTTTATCCTG-AATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCAAC 611510 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || ||||| || || | ||| || || || || ||||| Sbjct 611511 TTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611558 Score = 165 bits (182), Expect = 6e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||||||| || || | ||| || || ||||| |||||||| |||||||| | | Sbjct 611788 CCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGAATATTATAATCGGAA 611847 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || | ||| ||||| ||| | ||||||||||||||||| || ||| Sbjct 611848 AGTGTGCGTCCATCTTCCAATTGCTTGCCGGCAAAGATCAATCTTTGCTGATCTGGTGGA 611907 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || |||||||| ||||||| |||| | || ||||| ||| || Sbjct 611908 ATTCCCTCCTTGTCCTG-AATTTTTGCTTTGACATTTTCAATGGTATCAGACGCTTCAAC 611966 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || ||||| || ||||| | ||||| ||||| || ||||| Sbjct 611967 CTCCAAGGTAATAGTCTTTCCAGTAAGAGTTTTTACAAAAATTTGCAT 612014 Score = 154 bits (170), Expect = 1e-32 Identities = 178/237 (75%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| ||| || || | | ||| || || | ||||| || ||||||||||||||||||| Sbjct 610640 ATCATTGACCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGAATGTTAT 610699 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 |||| | || ||||| || || | |||||||||||| | |||||||| ||||| | Sbjct 610700 AATCAGAAAGTGTGCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATCAATCTCTGCTGGT 610759 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAA 29730 | || ||||| || || ||||| || |||||| | ||||||| |||| | |||||||| Sbjct 610760 CTGGGGGAATTCCTTCCTTGTCCTG-AATTTTGGCTTTGACATTTTCAATTGTGTCAGAG 610818 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || |||||||| || |||||||| || || | || ||||| || || |||||| Sbjct 610819 GCCTCAACTTCAAGGGTAATAGTTTTACCCGTGAGAGTCTTAACGAAAATTTGCATT 610875 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||||||| || || | ||| || || ||||| ||||| ||||||||||| | | Sbjct 611560 CCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGGATGTTATAATCGGAA 611619 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| || || | ||||||||| || | |||||||| |||||||| |||||| Sbjct 611620 AGTGTGCGTCCGTCTTCCAATTGTTTGCCGGCGAAGATCAATCTCTGCTGATCTGGCGGA 611679 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||| || || ||| || | || ||| | || | ||||||||| || || Sbjct 611680 ATACCTTCTTTATCCTG-AATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCAAC 611738 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || ||||| || || | ||| || || || || ||||| Sbjct 611739 TTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611786 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || | ||| || || | ||| | || || || ||||||||||||||||| | | Sbjct 612244 CCTCCTCTTAGACGTAGTACAAGATGTAAAGTCGACTCCTTTTGAATGTTATAATCAGAA 612303 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || ||||| || |||||| |||||||||| || || || || ||| Sbjct 612304 AGTGTACGTCCGTCTTCTAGTTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGAGGA 612363 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| |||||||| ||| || |||| | || || || ||| || Sbjct 612364 ATTCCTTCCTTGTCTTG-AATTTTTGCTTTCACGTTTTCAATTGTATCTGATGCTTCAAC 612422 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || || || || || || || |||||||| Sbjct 612423 CTCCAGGGTTATCGTTTTACCTGTCAATGTCTTGACGAAGATCTGCAT 612470 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | |||||| || ||||| || ||||| || || || | || || || Sbjct 612027 ACGAAGTACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAGTCTGAAAGTGTACGTCC 612086 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | ||| ||||| || | ||||||||||||||||| || ||||| || ||||| Sbjct 612087 GTCTTCCAATTGCTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCTTCTTT 612146 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | |||| ||| || |||| | || || || || ||||| || || || Sbjct 612147 ATCTTGGATTTTTGCTTTAACGTTTTCAATCGTATCTGAGGCCTCAACTTCGAGTGTAAT 612206 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | || || || || || ||||| Sbjct 612207 TGTTTTACCAGTGAGAGTCTTGACGAAAATTTGCAT 612242 >seq190 Length=691288 Score = 172 bits (190), Expect = 4e-38 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| ||||| ||||| || |||||||| ||||| || ||||| | | || | | Sbjct 255053 CGCAATACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCTGAGAGAGTTCTTCCA 254994 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | |||||| |||||| | ||||| | ||||| || || ||||| ||||||||| Sbjct 254993 TCTTCTAATTGTTTACCAGCAAAAATCAAACGCTGCTGGTCTGGAGGAATTCCCTCTTTG 254934 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| ||| ||| |||||| ||||||||| ||| ||||||||||| ||| Sbjct 254933 TCTTGGATCTTTGCTTTCACATTTTCTATTGTGTCAGAAGCTTCAACTTCAAGAGTAATA 254874 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || |||||||| |||||||| |||||||| Sbjct 254873 GTTTTTCCTGTTAAGGTCTTAACAAAGATCTGCAT 254839 Score = 167 bits (184), Expect = 2e-36 Identities = 168/216 (78%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| |||||||| || || ||||| ||||| || |||||||| | | || | | Sbjct 260056 CGCAATACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCTGACAAAGTTCTTCCA 259997 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | |||||||||||| | ||||| | ||||||||| || ||||| || || ||| Sbjct 259996 TCCTCTAACTGTTTGCCAGCAAAGATCAAGCGTTGCTGATCAGGTGGAATTCCTTCCTTG 259937 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || |||||||| || ||| |||| | ||||||||| ||| ||||||||||| || Sbjct 259936 TCCTG-AATTTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCAACTTCAAGAGTAAT 259878 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || |||||||| |||||||| |||||||| Sbjct 259877 AGTTTTTCCTGTTAAGGTCTTAACAAAGATCTGCAT 259842 Score = 158 bits (174), Expect = 9e-34 Identities = 166/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| |||||||| || || ||||| ||||| || |||||||||| || || | | Sbjct 255281 CGCAATACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCCGAAAGAGTTCTCCCA 255222 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||||||||||||| | |||| | ||| ||||| || ||||| || |||||| Sbjct 255221 TCTTCTAATTGTTTGCCAGCAAAAATCAGACGTTGTTGATCAGGGGGAATTCCTTCTTTG 255162 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| |||||||| || ||| | |||| ||||| ||| ||||| |||||||| || Sbjct 255161 TCTTG-AATTTTTGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTACCTCAAGAGTAAT 255103 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || | ||||| ||||| |||||||| Sbjct 255102 AGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCAT 255067 Score = 158 bits (174), Expect = 9e-34 Identities = 166/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| |||||||| || || ||||| ||||| || |||||||||| || || | | Sbjct 255509 CGCAATACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCCGAAAGAGTTCTCCCA 255450 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||||||||||||| | |||| | ||| ||||| || ||||| || |||||| Sbjct 255449 TCTTCTAATTGTTTGCCAGCAAAAATCAGACGTTGTTGATCAGGGGGAATTCCTTCTTTG 255390 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| |||||||| || ||| | |||| ||||| ||| ||||| |||||||| || Sbjct 255389 TCTTG-AATTTTTGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTACCTCAAGAGTAAT 255331 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| || || | ||||| ||||| |||||||| Sbjct 255330 AGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCAT 255295 Score = 138 bits (152), Expect = 9e-28 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || || |||||||| |||||||||||||| | | || | ||| || | ||| Sbjct 255954 ATGGAGTGTTGATTCTTTCTGAATGTTATAATCTGACAGAGTTCTCCCATCCTCTAATTG 255895 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| ||||| | || || | |||||| || || ||||| || ||||||||||| ||||| Sbjct 255894 TTTACCAGCGAAGATTAAACGTTGCTGGTCAGGAGGAATTCCTTCTTTGTCTTG-AATTT 255836 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | ||| ||| |||||| ||||||||| ||||||||| | || || || || || | Sbjct 255835 TAGCTTTCACATTTTCTATTGTGTCAGAAGCTTCTACTTCCAAGGTGATGGTCTTACCTG 255776 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | | ||||||||||| |||||||| Sbjct 255775 TGAGCGTTTTAACAAAAATCTGCAT 255751 Score = 132 bits (146), Expect = 4e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| || || ||||| ||||||||||| |||||| | || | ||| || Sbjct 256415 ACTAAATGGAGTGTAGATTCCTTTTGAATGTTGTAATCCAACAAAGTTCTTCCATCTTCT 256356 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | || || |||||| | ||||| | ||||||||| || ||||| || ||||||||||| Sbjct 256355 AACTGCTTCCCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTG- 256297 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||| || |||||| ||||||||| ||||||||| | ||| || ||||| Sbjct 256296 AATTTTAGCTTTCACGTTTTCTATTGTGTCAGAAGCTTCTACTTCCAAAGTGATGGTTTT 256237 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | || || ||||| || ||||| Sbjct 256236 TCCTGTGAGTGTCTTGACAAAGATTTGCAT 256207 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||||||||| || || || || || |||||||| || |||| || || | ||| Sbjct 260282 CAACACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTTCTCCCATC 260223 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | |||||| ||||| | || || | |||||| || || ||||| || |||||||| Sbjct 260222 CTCTAATTGTTTACCAGCGAAGATTAAACGTTGCTGGTCAGGAGGAATTCCTTCTTTGTC 260163 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 ||| |||||| | || ||| | |||| ||||| ||| ||||| || ||||| |||| Sbjct 260162 TTG-AATTTTCGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTACCTCGAGAGTAATAG 260104 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || | ||||| ||||| |||||||| Sbjct 260103 TTTTTCCTGTGAGTGTTTTGACAAAGATCTGCAT 260070 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| || | ||| || || |||||||| ||||||||||| || | | || | | Sbjct 255737 CGCAATACAAGATGGAGTGTTGATTCTTTCTGAATGTTATAGTCTGACAGAGTTCTCCCA 255678 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||||| |||||| | ||||| | ||||| || || ||||| ||||||||| Sbjct 255677 TCTTCTAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCCTCTTTG 255618 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| ||| || | |||| ||| ||||| ||||||||| | || || Sbjct 255617 TCTTGGATCTTTGTTTTCACGTTCTCTATTGTGCCAGAAGCTTCTACTTCCAAGGTGATG 255558 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || ||||| ||||| |||||||| Sbjct 255557 GTTTTTCCTGTCAATGTTTTGACAAAGATCTGCAT 255523 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || |||||||| || ||||||||||| | | || | ||| || | || Sbjct 256182 ATGAAGTGTTGATTCTTTCTGTATGTTATAATCTGACAGAGTTCTTCCATCCTCTAACTG 256123 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| ||||| | ||||| | ||||| || || ||||| || ||||||||||| ||||| Sbjct 256122 TTTACCAGCGAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTG-AATTT 256064 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | ||| ||| | |||| ||||| ||| ||||||||| | || || ||||| || | Sbjct 256063 TAGCTTTCACATTCTCTATTGTGTCTGAAGCTTCTACTTCTAACGTGATGGTTTTTCCTG 256004 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| ||||| || ||||| Sbjct 256003 TCAATGTTTTGACAAAGATTTGCAT 255979 Score = 122 bits (134), Expect = 7e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| ||||| || || ||||| |||||||||||||||||| | || | ||| Sbjct 260738 CAACACTAAATGCAGAGTAGATTCCTTTTGAATGTTATAATCCAACAAAGTTCTCCCATC 260679 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | ||| || |||||| | ||||| | |||||| || || ||||| || || ||||| Sbjct 260678 TTCTAATTGCTTCCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATTCCTTCCTTGTC 260619 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 ||| |||||| | || ||| |||| | || |||||| ||||||||| | || || | Sbjct 260618 TTG-AATTTTCGCCTTAACATTTTCGATTGTATCAGAAGCTTCTACTTCCAAGGTAATGG 260560 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || | ||||| || || || ||||| Sbjct 260559 TTTTCCCTGTGAGTGTTTTGACGAAGATTTGCAT 260526 >seq139 Length=3030711 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || || |||||||| | | ||| || ||| || | ||||| |||||| ||| Sbjct 1044746 CTTTCTGGATATTATAATCTGACAAGGTACGTCCATCTTCCAACTGTTTTCCAGCAAATA 1044687 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTT 29715 | | || ||| ||||| || ||||| || ||||| || || |||||| | || ||| || Sbjct 1044686 TAAGTCGTTGTTGATCAGGTGGAATTCCTTCTTTATCCTG-AATTTTAGCCTTCACATTT 1044628 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | |||||| || |||||||||||| || || ||||| || || || || || ||| Sbjct 1044627 TCAATAGTGTCTGATGCTTCTACTTCAAGGGTGATGGTTTTACCTGTCAAAGTCTTCACA 1044568 Query 29776 AATATCTGCATT 29787 |||||||||||| Sbjct 1044567 AATATCTGCATT 1044556 >seq2840 Length=3276 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || ||||| ||||||||||| | || ||||| || ||||| |||||||| | Sbjct 3087 TCCGCCTCTTAAACGAAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCAGA 3146 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || | |||||| |||||| | |||||||||||||||||||| || Sbjct 3147 CAAAGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGTGG 3206 Query 29679 AATACC 29684 ||| || Sbjct 3207 AATCCC 3212 >seq26 Length=4553502 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || ||||| ||||||||||| | || ||||| || ||||| |||||||| | Sbjct 253247 TCCGCCTCTTAAACGAAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCAGA 253188 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || | |||||| |||||| | |||||||||||||||||||| || Sbjct 253187 CAAAGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGTGG 253128 Query 29679 AATACC 29684 ||| || Sbjct 253127 AATCCC 253122 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || ||||| ||||||||||| | || ||||| || ||||| |||||||| | Sbjct 264827 TCCGCCTCTTAAACGAAGCACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCAGA 264886 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || | |||||| |||||| | |||||||||||||||||||| || Sbjct 264887 CAAAGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGTGG 264946 Query 29679 AATACC 29684 ||| || Sbjct 264947 AATCCC 264952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385205744534106