Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq65 82.4 7e-11 >seq65 Length=2871674 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| ||| |||| | | ||||||||| || || || ||||||||||| ||| Sbjct 610729 TGTTTGCCAGCGAAAATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTC-CTGAAT 610787 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || |||| | |||| ||||| | || ||| || || | ||| | ||||| || Sbjct 610788 TTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCAACTTCAAGGGTAATAGTTTTACC 610847 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || |||||||| ||||| Sbjct 610848 CGTGAGAGTCTTAACGAAAATTTGCAT 610874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483403481449840