Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq64 96.9 8e-15 >seq64 Length=2955609 Score = 96.9 bits (106), Expect = 8e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 111057 CAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAAT 111116 ||||||||||| |||||||||||||| | |||||||||||| ||||| ||||| ||| Sbjct 1697053 CAAGTTGAAACAGGAACTCCTTATATGCTTTATAAAGATCATTGCAATCGTAAATCAAAT 1697112 Query 111117 CAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154 || ||| |||||||||| || |||||||||||| Sbjct 1697113 CATCAAAATATAGGAACAATCAAAAGTAGTAATTTGTG 1697150 Score = 95.1 bits (104), Expect = 3e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 110829 GAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAA 110888 |||||||| ||||| | || ||||| ||||| | ||||| | ||| | || |||||| Sbjct 1696747 GAAGAACATAGAGCGAGAGAATTATTCTATGCTCTATGGATACCTGATCTTTTTATGAAA 1696806 Query 110889 CGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCT 110948 || ||| |||||||| | |||||| | |||||||| ||| |||||||||||| || Sbjct 1696807 CGAGTTTTGGAAAATGGTGTATGGTCTTTAATGTGTCCACATGAATCTCCTGGTCTACCT 1696866 Query 110949 GATGTATATGGAAAAGAGTTTGAAG 110973 ||| | | || | || ||||||| Sbjct 1696867 GATATTTGGGGCGATGAATTTGAAG 1696891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186769219492226