Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq190 116 3e-21 >seq190 Length=691288 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| |||||| | || || || || ||||| | || |||| || Sbjct 260298 ATGCAAATTTTTGTCAAAACACTCACAGGAAAAACTATTACTCTTGAGGTAGAAGCCTCA 260357 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | |||||| ||||| || |||||||| | || ||| ||| Sbjct 260358 GATACAATAGAGAATGTGAAAGCTAAAATCCAAGATAAAGAAGGAATTCCTCCTGACCAA 260417 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| ||| ||||| |||||||||||| | |||| | |||||||| Sbjct 260418 CAACGTTTGATTTTTGCTGGCAAGCAATTAGAAGATGGAAGAACTCTTTCGGATTACAAT 260477 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||||||||| ||||| |||||| | | |||||||| Sbjct 260478 ATCCAAAAGGAATCTACACTCCATTTGGTATTGCGACTTCGAGGAGG 260524 Score = 109 bits (120), Expect = 4e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 106343 AAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAA 106402 ||||||| ||||||||||| | ||| |||||||||| | || |||| ||| ||||| Sbjct 255150 AAAAATTCAAGACAAAGAAGGAATTCCCCCTGATCAACAACGTCTGATTTTTGCTGGCAA 255209 Query 106403 ACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACA 106462 ||||||||||||| | |||| | ||||| || || ||||| ||||||||||| || Sbjct 255210 ACAATTAGAAGATGGGAGAACTCTTTCGGATTATAATATCCAAAAGGAATCTACACTCCA 255269 Query 106463 TTTAGTATTG 106472 ||| |||||| Sbjct 255270 TTTGGTATTG 255279 Score = 109 bits (120), Expect = 4e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 106343 AAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAA 106402 ||||||| ||||||||||| | ||| |||||||||| | || |||| ||| ||||| Sbjct 255378 AAAAATTCAAGACAAAGAAGGAATTCCCCCTGATCAACAACGTCTGATTTTTGCTGGCAA 255437 Query 106403 ACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACA 106462 ||||||||||||| | |||| | ||||| || || ||||| ||||||||||| || Sbjct 255438 ACAATTAGAAGATGGGAGAACTCTTTCGGATTATAATATCCAAAAGGAATCTACACTCCA 255497 Query 106463 TTTAGTATTG 106472 ||| |||||| Sbjct 255498 TTTGGTATTG 255507 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||||||||| | || || |||||||| ||| ||||| |||| | Sbjct 255751 ATGCAGATTTTTGTTAAAACGCTCACAGGTAAGACCATCACCTTGGAAGTAGAAGCTTCT 255810 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | |||||| |||||| ||||||||||| | || ||| || Sbjct 255811 GACACAATAGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGACCAG 255870 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || ||||||||||| ||| | |||| || ||||| ||| Sbjct 255871 CAACGTTTAATCTTCGCTGGTAAACAATTAGAGGATGGGAGAACTCTGTCAGATTATAAC 255930 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || |||||||| ||||| ||| | || ||||| | |||||||| Sbjct 255931 ATTCAGAAAGAATCAACACTCCATCTTGTTTTGAGACTTCGAGGAGG 255977 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || ||| | || || || ||||| || ||||| |||| | Sbjct 256207 ATGCAAATCTTTGTCAAGACACTCACAGGAAAAACCATCACTTTGGAAGTAGAAGCTTCT 256266 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | |||||| |||||| ||||||||||| | || |||||| Sbjct 256267 GACACAATAGAAAACGTGAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 256326 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || || || ||||||||| | |||| || ||||||||| Sbjct 256327 CAACGTTTGATCTTTGCTGGGAAGCAGTTAGAAGATGGAAGAACTTTGTTGGATTACAAC 256386 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||||||||| |||||||| || || | ||||| || Sbjct 256387 ATTCAAAAGGAATCTACACTCCATTTAGTTTTAAGACTCCGAGGTGG 256433 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || |||||| | || || || ||||||||| ||||| |||| | Sbjct 260526 ATGCAAATCTTCGTCAAAACACTCACAGGGAAAACCATTACCTTGGAAGTAGAAGCTTCT 260585 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | || || |||||| ||||| ||||| | || ||| || Sbjct 260586 GATACAATCGAAAATGTTAAGGCGAAAATTCAAGACAAGGAAGGAATTCCTCCTGACCAG 260645 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || || |||||||||||| | |||| || ||||| ||| Sbjct 260646 CAACGTTTGATCTTTGCTGGGAAGCAATTAGAAGATGGGAGAACTTTGTTGGATTATAAC 260705 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || ||||| |||||||| || |||||||| ||||| | || |||||| Sbjct 260706 ATTCAAAAGGAATCTACTCTGCATTTAGTGTTGAGACTCCGTGGAGGA 260753 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||||||||| || || ||||| || | ||| |||| | Sbjct 255979 ATGCAAATCTTTGTCAAAACATTGACAGGAAAAACCATCACGTTAGAAGTAGAAGCTTCA 256038 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | |||||| |||||| ||||||||||| | || || || Sbjct 256039 GACACAATAGAGAATGTGAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCAGACCAG 256098 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | | || | || || ||||| ||||| ||| | |||| || ||||| ||| Sbjct 256099 CAGCGTTTGATCTTCGCTGGTAAACAGTTAGAGGATGGAAGAACTCTGTCAGATTATAAC 256158 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| |||||||| ||||| ||| | |||||||| | |||||||| Sbjct 256159 ATACAGAAAGAATCAACACTTCATCTTGTATTGAGACTCCGAGGAGG 256205 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || |||||||| || || || || || || ||||| | ||| ||| | Sbjct 259842 ATGCAGATCTTTGTTAAGACCTTAACAGGAAAAACTATTACTCTTGAAGTTGAAGCTTCT 259901 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | || || ||||||| ||||| ||||| | || |||||| Sbjct 259902 GACACAATCGAAAATGTTAAGGCAAAAATTCAGGACAAGGAAGGAATTCCACCTGATCAG 259961 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| |||||||| ||||| ||| | |||| || ||||| || Sbjct 259962 CAACGCTTGATCTTTGCTGGCAAACAGTTAGAGGATGGAAGAACTTTGTCAGATTATAAT 260021 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||| ||||||||||| ||||| |||||| Sbjct 260022 ATCCAAAAGGAATCTACACTCCATTTGGTATTG 260054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402315546878528