Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq78 98.7 1e-15 >seq78 Length=788090 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 89198 CGATCCTGTCTTGCATATAGAACTTAGG--AGGTGGGCTGATATATTTATTATCGCGCCA 89255 ||| ||||| || || || || || || | |||||| ||| ||||| | || || || Sbjct 303404 CGACCCTGTGTTACACATTGA--TTTGGTAAAGTGGGCCGATTTATTTCTAATTGCTCCG 303347 Query 89256 CTAACGGCTAATACTCTAGCGAAGATAGCTAATGGTATATGCGACAACTTACTAACTTCT 89315 || |||||||| || | || || || | |||||||||||||||| | |||||| Sbjct 303346 TTAGATGCTAATACCCTCGGTAAAATGGCCAGTGGTATATGCGACAACATCTTAACTTGC 303287 Query 89316 ATAGTTAGGGCATGGGATATATCAAAGCCCCTTATTTTTTGTCCTGCCATGAATACTCTA 89375 | | | || ||||| | ||||| || |||| || ||||||||||| || | Sbjct 303286 GTCGCACGTGCTTGGGACCCAATGAAGCCTCTGGTTTTCTGCCCTGCCATGAACACAAAA 303227 Query 89376 ATGTGGGAACATCCTATTACTG 89397 ||||||||||||||| |||||| Sbjct 303226 ATGTGGGAACATCCTGTTACTG 303205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603159191047840