Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq65 170 1e-37 seq190 143 2e-29 seq139 82.4 5e-11 >seq65 Length=2871674 Score = 170 bits (188), Expect = 1e-37 Identities = 184/237 (78%), Gaps = 5/237 (2%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||| | || | ||| | ||| ||||||||||||||||||||| || Sbjct 612243 GCCTCCTCTTAGACGTAGTACAAGATGTAAAGTCGACTCCTTTTGAATGTTATAATCAGA 612302 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| || ||||||| ||||| || || |||||||| || | ||||||||| || || Sbjct 612303 AAGTGTACGTCCGTCTTCTAGTTGCTTTCCAGCAAATATCAATCTCTGTTGGTCTGGAGG 612362 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCT-TCGCTCTCC 34656 | ||| ||||||||| ||| ||||| ||| ||| | |||||| ||| ||| || Sbjct 612363 AATTCCTTCCTTGTCT-TGAATTTTTGCTTTCACGTTTTCAATTGTATCTGATGCT-TCA 612420 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG-TTGAT 34712 || |||| ||||||||||||||| || || || || || || ||||||||| ||||| Sbjct 612421 ACCTCCAGGGTTATCGTTTTACCTGTCAATGTCTTGACGAAGATCTGCATGATTGAT 612477 Score = 116 bits (128), Expect = 2e-21 Identities = 174/243 (72%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 34466 ATATCCAATCGTCG-CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGA 34524 |||| |||| | | || |||| ||||| | || | || ||||| || |||||| Sbjct 610633 ATATGGAATCATTGACCACCTCGGAGACGAAGTACAAGGTGAAGAGTCGATTCTTTTTGA 610692 Query 34525 ATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGC 34584 ||||||||||| |||||||| || ||||||| | |||||| || || || || || | | Sbjct 610693 ATGTTATAATCAGAAAGTGTGCGTCCGTCTTCCAATTGTTTGCCAGCGAAAATCAATCTC 610752 Query 34585 TGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGT 34643 || ||||| || || | ||| |||||||| ||| ||| | ||| || | |||||| Sbjct 610753 TGCTGGTCTGGGGGAATTCCTTCCTTGTC-CTGAATTTTGGCTTTGACATTTTCAATTGT 610811 Query 34644 GTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTG 34703 ||| | ||| ||||| | ||| || |||||||| || | || || || ||||| || Sbjct 610812 GTCAGAGGCCTCAACTTCAAGGGTAATAGTTTTACCCGTGAGAGTCTTAACGAAAATTTG 610871 Query 34704 CAT 34706 ||| Sbjct 610872 CAT 610874 Score = 111 bits (122), Expect = 1e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | || | ||| ||||| ||||||||||| |||||||| ||| Sbjct 611788 CCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGAATATTATAATCGGAA 611847 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | ||||| | ||| || |||||||| || || | || || || || || Sbjct 611848 AGTGTGCGTCCATCTTCCAATTGCTTGCCGGCAAAGATCAATCTTTGCTGATCTGGTGGA 611907 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCA 34657 | |||||||||||| ||| ||||| ||| || | ||| || || |||| || | Sbjct 611908 ATTCCCTCCTTGTC-CTGAATTTTTGCTTTGACATTTTCAATGGTATCAGACGCT-TCAA 611965 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| ||| || || || || || | ||||| |||||||| ||||| Sbjct 611966 CCTCCAAGGTAATAGTCTTTCCAGTAAGAGTTTTTACAAAAATTTGCAT 612014 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||||| || | ||| || || |||||||| ||||||||||| ||| Sbjct 611104 CCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCCGAA 611163 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||||||||| || ||||| || || | || || || ||||| Sbjct 611164 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGCGGA 611223 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || || || ||| || | ||||| | ||||||||| ||| || Sbjct 611224 ATACCTTCTTTATC-CTGAATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCAAC 611282 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || |||||||| || | || || || ||||| ||||| Sbjct 611283 TTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611330 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||||| || | ||| || || |||||||| ||||||||||| ||| Sbjct 611332 CCTCCTCTCAAACGCAGAACAAGATGAAGGGTTGATTCCTTTTGGATGTTATAATCCGAA 611391 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | |||||||||||||| || ||||| || || | || || || ||||| Sbjct 611392 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGCTGATCTGGCGGA 611451 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || || || ||| || | ||||| | ||||||||| ||| || Sbjct 611452 ATACCTTCTTTATC-CTGAATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCAAC 611510 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || |||||||| || | || || || ||||| ||||| Sbjct 611511 TTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611558 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | || | ||| ||||| |||||||| ||||||||||| ||| Sbjct 611560 CCTCCTCTCAAACGAAGAACAAGATGCAGAGTTGATTCCTTTTGGATGTTATAATCGGAA 611619 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || ||||||| | |||||| ||||| || || || | ||| || || ||||| Sbjct 611620 AGTGTGCGTCCGTCTTCCAATTGTTTGCCGGCGAAGATCAATCTCTGCTGATCTGGCGGA 611679 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || || || || ||| || | ||||| | ||||||||| ||| || Sbjct 611680 ATACCTTCTTTATC-CTGAATCTTGGCCTTAACATTCTCAATTGTGTCAGAAGCCTCAAC 611738 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || |||||||| || | || || || ||||| ||||| Sbjct 611739 TTCAAGGGTAATGGTTTTACCTGTGAGGGTCTTGACGAAAATTTGCAT 611786 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | ||| || || ||||| ||||| || || |||||| Sbjct 612016 CCACCACGAAGACGAAGTACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAGTCTGAA 612075 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || ||||||| | ||| || ||||| || || || | || || || || || Sbjct 612076 AGTGTACGTCCGTCTTCCAATTGCTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGA 612135 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCAC 34658 | || || || ||| ||| ||||| ||||||| | ||| || ||| | ||| || Sbjct 612136 ATGCCTTCTTTATCTTGGAT-TTTTGCTTTAACGTTTTCAATCGTATCTGAGGCCTCAAC 612194 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| | || || |||||||| || | || || || ||||| |||||| Sbjct 612195 TTCGAGTGTAATTGTTTTACCAGTGAGAGTCTTGACGAAAATTTGCATG 612243 >seq190 Length=691288 Score = 143 bits (158), Expect = 2e-29 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| || ||||| || | |||||| || || || ||||||||||| ||||| Sbjct 255749 CCTCCTCGGAGTCGCAATACAAGATGGAGTGTTGATTCTTTCTGAATGTTATAGTCTGAC 255690 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | | ||||| | |||||||| ||||| || |||||||| ||||| || || Sbjct 255689 AGAGTTCTCCCATCTTCTAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGA 255630 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | |||||| |||||| |||| |||||||| ||| | |||||| | ||| || | Sbjct 255629 ATTCCCTCTTTGTCTTGGATC-TTTGTTTTCACGTTCTCTATTGTGCCAGAAGCT-TCTA 255572 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||| ||| || ||||| || || || ||||| ||||| ||||||||| Sbjct 255571 CTTCCAAGGTGATGGTTTTTCCTGTCAATGTTTTGACAAAGATCTGCATG 255522 Score = 138 bits (152), Expect = 7e-28 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||| | |||||||||||||||||| |||||| |||||||| || || || Sbjct 260297 GCCTCCTCGAAGTCTCAACACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCCGA 260238 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| |||| | | || || | ||||||||| || || |||||||| || ||||| || || Sbjct 260237 AAGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAAGATTAAACGTTGCTGGTCAGGAGG 260178 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||| || |||||| ||| ||| | ||||| | ||||||||| ||| | Sbjct 260177 AATTCCTTCTTTGTCT-TGAATTTTCGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTA 260119 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || || ||||| || || | ||||| ||||| ||||||||| Sbjct 260118 CCTCGAGAGTAATAGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCATG 260069 Score = 134 bits (148), Expect = 9e-27 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||| | ||| || | |||||| || || || ||||||||||||||||| Sbjct 255978 GCCTCCTCGAAGTCTCAAAACAAGATGGAGTGTTGATTCTTTCTGAATGTTATAATCTGA 255919 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || |||| | | || || | ||||||||| || || |||||||| || ||||| || || Sbjct 255918 CAGAGTTCTCCCATCCTCTAATTGTTTACCAGCGAAGATTAAACGTTGCTGGTCAGGAGG 255859 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCC 34656 | ||| || |||||| ||| ||| | ||| || | |||||||| ||| || Sbjct 255858 AATTCCTTCTTTGTCT-TGAATTTTAGCTTTCACATTTTCTATTGTGTCAGAAGCT-TCT 255801 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| ||| || || ||||| || | |||||| |||||||||||||| Sbjct 255800 ACTTCCAAGGTGATGGTCTTACCTGTGAGCGTTTTAACAAAAATCTGCAT 255751 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| ||||| ||||||||||| || |||||||| || |||||||| ||| Sbjct 255293 CCGCCACGAAGTCGCAATACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCCGAA 255234 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | | ||||| | |||||| || ||||| || | ||| ||||| || || || Sbjct 255233 AGAGTTCTCCCATCTTCTAATTGTTTGCCAGCAAAAATCAGACGTTGTTGATCAGGGGGA 255174 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| || |||||| ||| ||||| ||||| | ||||||||| ||| || Sbjct 255173 ATTCCTTCTTTGTCT-TGAATTTTTGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTAC 255115 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | || || ||||| || || | ||||| ||||| ||||||||| Sbjct 255114 CTCAAGAGTAATAGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCATG 255066 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||| ||||| ||||||||||| || |||||||| || |||||||| || Sbjct 255522 GCCGCCACGAAGTCGCAATACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCCGA 255463 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| |||| | | ||||| | |||||| || ||||| || | ||| ||||| || || || Sbjct 255462 AAGAGTTCTCCCATCTTCTAATTGTTTGCCAGCAAAAATCAGACGTTGTTGATCAGGGGG 255403 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||| || |||||| ||| ||||| ||||| | ||||||||| ||| | Sbjct 255402 AATTCCTTCTTTGTCT-TGAATTTTTGCCTTAACATTCTCTATTGTGTCTGAAGCCTCTA 255344 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || ||||| || || | ||||| ||||| |||||||| Sbjct 255343 CCTCAAGAGTAATAGTTTTTCCTGTGAGTGTTTTGACAAAGATCTGCAT 255295 Score = 114 bits (126), Expect = 8e-21 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||| ||||| ||||||||||| || |||||||| || ||||||||||| Sbjct 260069 GCCGCCACGAAGTCGCAATACCAAATGGAGTGTAGATTCCTTTTGGATATTATAATCTGA 260010 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | |||| | || || | ||||| || ||||| || || || || || || || || Sbjct 260009 CAAAGTTCTTCCATCCTCTAACTGTTTGCCAGCAAAGATCAAGCGTTGCTGATCAGGTGG 259950 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCC 34656 | ||| |||||||| ||| ||||| ||||| | |||||||| ||| || Sbjct 259949 AATTCCTTCCTTGTC-CTGAATTTTTGCCTTAACATTTTCGATTGTGTCAGAAGCT-TCA 259892 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| | || || ||||| || ||||| || || ||||| ||||||||| Sbjct 259891 ACTTCAAGAGTAATAGTTTTTCCTGTTAAGGTCTTAACAAAGATCTGCATG 259841 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| ||| ||||| ||||||||||| || |||||||| || || ||||| || Sbjct 260525 GCCTCCTCGAAGTCGCAATACCAAATGGAGTGTAGATTCCTTTTGGATATTGTAATCCGA 260466 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| |||| | ||||| | ||| || || ||||| || ||||| |||||||| || || Sbjct 260465 AAGAGTTCTTCCATCTTCTAATTGCTTGCCAGCAAAAATCAAACGTTGTTGGTCAGGAGG 260406 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||| || || ||| ||| ||| | ||| || | ||||| ||| | || | Sbjct 260405 AATTCCTTCTTTATCTTGGAT-TTTAGCTTTCACATTCTCTATTGTATCTGAGGCTTCTA 260347 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | || || ||||| || || | ||||| |||||||| |||||| Sbjct 260346 CCTCAAGAGTAATAGTTTTTCCTGTGAGTGTTTTGACAAAAATTTGCATG 260297 Score = 109 bits (120), Expect = 3e-19 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 |||||| ||||| ||||| |||||||||||||||||||| | | |||| | | || Sbjct 260738 CAACACTAAATGCAGAGTAGATTCCTTTTGAATGTTATAATCCAACAAAGTTCTCCCATC 260679 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| | ||| || || ||||| || ||||| || ||||| || || | ||| |||||||| Sbjct 260678 TTCTAATTGCTTCCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATTCCTTCCTTGTC 260619 Query 34614 TGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATC 34671 | ||| ||| | ||||| | ||||| || ||| || ||||||| ||| || Sbjct 260618 T-TGAATTTTCGCCTTAACATTTTCGATTGTATCAGAAGCT-TCTACTTCCAAGGTAATG 260561 Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| || || | ||||| || || || |||||| Sbjct 260560 GTTTTCCCTGTGAGTGTTTTGACGAAGATTTGCATG 260525 Score = 100 bits (110), Expect = 2e-16 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| || | ||| || | ||| || || || || || |||||||||||||| Sbjct 256206 GCCTCCTCGGAGTCTCAATACAAGATGAAGTGTTGATTCTTTCTGTATGTTATAATCTGA 256147 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || |||| | || || | |||||||| || || || |||||||| ||||| || || Sbjct 256146 CAGAGTTCTTCCATCCTCTAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGAGG 256087 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCC 34656 | ||| || |||||| ||| ||| | ||| || | ||||||||| ||| || Sbjct 256086 AATTCCTTCTTTGTCT-TGAATTTTAGCTTTCACATTCTCTATTGTGTCTGAAGCT-TCT 256029 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| | || || ||||| || || || ||||| ||||| || |||||| Sbjct 256028 ACTTCTAACGTGATGGTTTTTCCTGTCAATGTTTTGACAAAGATTTGCATG 255978 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || |||||||| || |||||||||||||| ||||| | | |||| | ||| Sbjct 256418 AAAACTAAATGGAGTGTAGATTCCTTTTGAATGTTGTAATCCAACAAAGTTCTTCCATCT 256359 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | || || || ||||| || ||||| || || || || || | ||| || |||||| Sbjct 256358 TCTAACTGCTTCCCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCT 256299 Query 34615 GTGATCTTTTGTTTTAACG-ATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCG 34672 ||| ||| | ||| ||| | |||||||| ||| || ||||||| || || | Sbjct 256298 -TGAATTTTAGCTTTCACGTTTTCTATTGTGTCAGAAGCT-TCTACTTCCAAAGTGATGG 256241 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || | || || ||||| || |||||| Sbjct 256240 TTTTTCCTGTGAGTGTCTTGACAAAGATTTGCATG 256206 >seq139 Length=3030711 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/193 (72%), Gaps = 5/193 (3%) Strand=Plus/Minus Query 34517 CCTTT-TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || || ||||||||||| | || || | ||||| | ||||| || |||||| Sbjct 1044747 CCTTTCTGGATATTATAATCTGACAAGGTACGTCCATCTTCCAACTGTTTTCCAGCAAAT 1044688 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GA 34634 || | || ||||| || || || | ||| || || || ||| ||| | || || Sbjct 1044687 ATAAGTCGTTGTTGATCAGGTGGAATTCCTTCTTTATC-CTGAATTTTAGCCTTCACATT 1044629 Query 34635 TAAAATTGTGTCT-TCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| |||||| ||| || ||||| | ||| || |||||||| || || || |||| Sbjct 1044628 TTCAATAGTGTCTGATGCT-TCTACTTCAAGGGTGATGGTTTTACCTGTCAAAGTCTTCA 1044570 Query 34694 CAAAAATCTGCAT 34706 |||| |||||||| Sbjct 1044569 CAAATATCTGCAT 1044557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314718606691778