Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_001716.2 Length=153080 Score E Sequences producing significant alignments: (Bits) Value seq622 87.8 2e-12 >seq622 Length=300832 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/117 (76%), Gaps = 12/117 (10%) Strand=Plus/Plus Query 56861 TATAACACAGATTATGAGCCATCATAATACTTGGATACAAACTTTGGAAATCAAAAACTA 56920 ||||||||| |||||||||||||||||||||||||||||| | || ||||| ||| Sbjct 237212 TATAACACAAATTATGAGCCATCATAATACTTGGATACAA------GGAAGCAAAATCTA 237265 Query 56921 CTGTTGGAGTA------GCATAATAACCTATTTTCGGTTCTAAAACTGTAGCACCTT 56971 |||| | || |||||||| || || | ||||| | ||||||||| |||| Sbjct 237266 GAGTTGAAATAGGATCTGCATAATACCCCTTTCTTGGTTCAATAACTGTAGCTCCTT 237322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 489677429462400