Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1988 89.7 4e-13 >seq1988 Length=441106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 119/163 (73%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATTGT 20458 |||||| | || |||||||| |||| || || ||| | || || || |||||| Sbjct 379880 AATGGCACTTCCACCATGTCAC-TGCTTAGCACAGTTTCATGTGGCCAAGGGAAAATTGT 379938 Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518 | || | | |||| ||| || ||||||||||| |||||||||| || || ||||||| Sbjct 379939 CCTGCCTATTGTACCAAAGAAGTGCTGATATGGGCTTGGGTGTTCCCTTTAACATTGCAA 379998 Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTT 20561 ||||||| | | || | |||||||||||||| || |||| Sbjct 379999 GTTATGCTTTATTGACACACATGATTGCACATGTAACCAATTT 380041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399143809780645