Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2668 150 1e-31 >seq2668 Length=134947 Score = 150 bits (166), Expect = 1e-31 Identities = 305/444 (69%), Gaps = 14/444 (3%) Strand=Plus/Minus Query 13218 TGGCCCCGTTGTATGAAGCAGAGACCCGAGCAGATGGCGGATGCCGGTTTCTTCTACACT 13277 |||||||| ||||||| || | ||||||| | | || || || || || ||||| || Sbjct 31125 TGGCCCCGCAGTATGAAACAAAAACCCGAGGAACTTGCCGAAGCTGGCTTTTTCTATACC 31066 Query 13278 GGCTACGGTGACAATACAAAGTGCTTCTATTGTGACGGCGGATTGAAAGATTGGGAGCCG 13337 || |||| || || || |||||| ||||||||||| || | | ||||||||| Sbjct 31065 GGTAACGGAGATAAGACGTTGTGCTTTTATTGTGACGGGGGTCTTAGGGATTGGGAGAAC 31006 Query 13338 GAAGATGTACCTTGGGAACAGCATGTAAGATGGTTCGACCGTTGCGCCTACGTTCAGCTA 13397 || |||||||| ||||| || |||| | |||||||| || |||||||| || || || Sbjct 31005 GACGATGTACCGTGGGAGCAACATGCTCGTTGGTTCGATCGCTGCGCCTATGTACAACTC 30946 Query 13398 GTCAAGGGTAGAGACTACGTACAGAAAGTCATCACGGAAGCCTGCGTGTTACCCGGT--- 13454 || || || | || |||||||| ||||| || ||||||| || || |||||| | Sbjct 30945 GTAAAAGGGCGGGATTACGTACAAAAAGTTATTTCGGAAGCTTGTGTCATACCCGCTCCC 30886 Query 13455 -GAGAACACTACCGTGTCAACAGCCGCGCCAGTGTCCG-AGCCTATACCTGAGACA--AA 13510 ||||| | | | || | ||| | || ||| || | | | | ||| | Sbjct 30885 AAGGAACA-AAAAGAGACACCTGCCCCCGCACCCCCCGCAG--AAAAGGTTA-ACAGTGA 30830 Query 13511 AATTGAAAAAGAGCCCCAAGTGGAAGATTCGAAACTGTGCAAGATATGCTACGTAGAAGA 13570 || ||| || | ||||| | ||||| || ||||| || ||||| || || || || Sbjct 30829 AAAGGAAGAA-AACCCCA--TAGAAGACTCAAAACTTTGTAAGATTTGTTATAACGAGGA 30773 Query 13571 GTGCATCGTGTGCTTCGTACCGTGCGGTCACGTGGTGGCGTGTGCCAAGTGTGCGTTGAG 13630 | | ||| ||||| ||||| ||||||||||| ||||| ||||| || || | ||| Sbjct 30772 ACGTAACGTTTGCTTTGTACCTTGCGGTCACGTTGTGGCCTGTGCGAAATGCTCTTTGTC 30713 Query 13631 TGTAGATAAGTGTCCGATGTGTCG 13654 || || || || |||||||| Sbjct 30712 GACCGACAAATGCCCCATGTGTCG 30689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395035423458481