Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq5066 105 5e-18 >seq5066 Length=19128 Score = 105 bits (116), Expect = 5e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||||||||| | ||| || || || | |||||| |||| || | ||| ||||| ||||| Sbjct 19042 CTCCTTTTGAATATTATAGTCTGATAGTGTACGACCGTCTTCAAGTTGCTTGCCAGCAAA 18983 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 ||||| ||||||||||| | || | |||||||| || ||| ||||||| | Sbjct 18982 GATCAAACGCTGTTGATCTGGGGGAATGCCTTCTTTGTCTTGAATCTTTGCTTTGACATT 18923 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | || || || || || || | |||||||||||| || || |||||||| || Sbjct 18922 CTCGATAGTATCCGAAGGTTCAACTTCGAGCGTTATAGTTTTACCTGTAAGAGTTTTAAC 18863 Query 43098 AAAAATTTGCATT 43110 ||||| |||||| Sbjct 18862 GAAAATCTGCATT 18850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381331203351138