Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2745 102 1e-16 >seq2745 Length=21359 Score = 102 bits (112), Expect = 1e-16 Identities = 143/197 (73%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 |||||| ||||| |||| || || | ||| |||| || |||||| |||||||| || Sbjct 19233 AGGCTGCAAACACGTAAAGGGTATACTTTTATATGGCCCGCCTGGTACTGGTAAAACTTT 19174 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATG 164617 |||||| ||| || | ||| | ||||| ||| || || |||||||| |||| Sbjct 19173 AATGGCACGACAAATCGG-CAAAATGTTAAA-CGCAAGGGAACCC--AAAATTGTAAATG 19118 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 ||||| || | ||| |||||||||| |||||| || || || | |||| ||||| Sbjct 19117 GTCCTCAAATCTTGGACAAATATGTCGGTGAGAGTGAGGCCAACATCAGAAGATTGTTCG 19058 Query 164678 AGGAGGCTGAAGAAGAA 164694 ||| |||||||||||| Sbjct 19057 CGGATGCTGAAGAAGAA 19041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595810468767600