Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq1634 87.8 1e-12 >seq1634 Length=116021 Score = 87.8 bits (96), Expect = 1e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || || || || ||||| || || || || || ||||| ||||||||| | | ||||| Sbjct 46160 GGATTTTCAGTCGAGGGCCAGGAGAACATTCAGGAAATATTATCGAAACAACTTTATTTA 46219 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 ||||| ||| | ||| || ||| | || ||| ||||||||||| |||| | ||| || Sbjct 46220 TGTCAGTGTCTTGCTGCCTTAATGCTTGTAAGAACTGGTGGTCATTTTGTTGTTAAACTT 46279 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTT 4077 || ||| | ||||| | || || | ||| | || || | ||||| || | ||| Sbjct 46280 TTTGATGTTTTTACTCACTTCAGCGTTGGAATTGTTTACATTATGTACAGGTGTTT 46335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276525756324283