Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09]
8,261 sequences; 389,907,520 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq5066 118 1e-21
>seq5066
Length=19128
Score = 118 bits (130), Expect = 1e-21
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856
|||||||| | ||||| |||||||| | ||||| || | ||||||| || || |
Sbjct 19059 ACCAAGTGAAGTGTAGACTCCTTTTGAATATTATAGTC--TGATAGTGTACGACCGTCTT 19002
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| || || || || ||||||| || | || |||||||| ||||| ||||||||||| |
Sbjct 19001 CAAGTTGCTTGCCAGCAAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCTTTGTCTT 18942
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| ||||| ||||| ||| ||| || | | || || || | ||| || ||||
Sbjct 18941 GAATCTTTGCTTTGACATTCTCGATAGTATCCGAAGGTTCAACTTCGAGCGTTATAGTTT 18882
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || ||||||||||| || || ||||||||
Sbjct 18881 TACCTGTAAGAGTTTTAACGAAAATCTGCAT 18851
Score = 114 bits (126), Expect = 1e-20
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||| || || |||||||| ||||| | |||||||||| ||| ||| || ||| |
Sbjct 18831 ACCAGATGTAAGGTAGATTCTTTTTGAATGTTATAATCGG--ATAAGGTTCGACCATCTT 18774
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||| ||||| |||| || || | |||||||||||| ||||| ||||||||||| |
Sbjct 18773 CAAGCTGCTTTCCAGCAAAAATCAAACGTTGCTGATCTGGGGGAATGCCTTCTTTGTCTT 18714
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| || || || ||| ||| || || | | || || || | || || || |
Sbjct 18713 GAATCTTCGCTTTAACGTTTTCGATGGTATCGGATGGTTCAACTTCTAAAGTAATAGTCT 18654
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || ||||| ||||| || ||||||||
Sbjct 18653 TACCCGTGAGAGTCTTCACGAAAATCTGCAT 18623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448244908329960
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |