Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_006633.1 Length=27346 Score E Sequences producing significant alignments: (Bits) Value seq738 179 6e-41 seq219 147 4e-31 seq2637 136 7e-28 seq1610 136 7e-28 seq1095 114 2e-21 seq473 111 3e-20 seq4538 107 3e-19 seq2327 105 1e-18 seq1917 105 1e-18 seq1459 104 4e-18 seq4336 102 1e-17 seq912 102 1e-17 seq67 102 1e-17 seq30 102 1e-17 seq1739 100 5e-17 seq399 100 5e-17 seq2741 96.9 6e-16 seq2672 95.1 2e-15 seq1656 95.1 2e-15 seq1502 95.1 2e-15 seq8260 91.5 3e-14 seq907 91.5 3e-14 seq446 91.5 3e-14 seq6363 89.7 9e-14 seq2083 89.7 9e-14 seq710 89.7 9e-14 seq1173 87.8 3e-13 seq3484 86.0 1e-12 seq1427 86.0 1e-12 seq5705 84.2 4e-12 seq1726 84.2 4e-12 seq343 84.2 4e-12 seq1505 82.4 1e-11 seq2062 80.6 5e-11 seq1166 80.6 5e-11 >seq738 Length=292342 Score = 179 bits (198), Expect = 6e-41 Identities = 202/272 (74%), Gaps = 24/272 (9%) Strand=Plus/Plus Query 9551 TTAtttttttttCAGTAGTTATCAAAAAAGTTTGAAAAATCCAAAAGTGCACGCCTCATA 9610 |||||| | || || ||| || |||||||||| |||||||| ||||||| || | ||| Sbjct 203538 TTATTTATGTTACAATAG--ATTGAAAAAGTTTGCAAAATCCAGAAGTGCATGCTTTATA 203595 Query 9611 ATTTAATTTTCCATAATAAAATTGATTG----------------AAATAAAATACAA--A 9652 || | ||||| || ||| || ||| ||| ||| |||| || | Sbjct 203596 ATCTCATTTTTCACAATTAAGTTGTTTGCGTTATTGCTCACATGAAACGAAATTGAATAA 203655 Query 9653 TACTTTTAAGTCTTTCGCGCCATT----GTCTACCAAGAAAAGAAAGATACTGCGTATGT 9708 |||| |||| |||| ||||||||| ||| ||| |||||||||||||||||| | | Sbjct 203656 TACTCTTAAATCTTCCGCGCCATTCATCGTCCACCCAGAAAAGAAAGATACTGCCCAGAT 203715 Query 9709 GTTGTAAACGAACTTTATTTACATAGATATAAATACGCAAACGATAAGTAGATTTTACTT 9768 |||||||||||| ||||||||| | | || | | | |||||||| | |||||| || Sbjct 203716 ATTGTAAACGAACCCTATTTACATTGTTGTAGAAATACTAACGATAAATGAATTTTAGTT 203775 Query 9769 TATTGCTAATTATAATTAAACTACATTGAATT 9800 |||||||||||||||||||||||||||||||| Sbjct 203776 TATTGCTAATTATAATTAAACTACATTGAATT 203807 Score = 143 bits (158), Expect = 5e-30 Identities = 128/161 (80%), Gaps = 11/161 (7%) Strand=Plus/Plus Query 12666 AATACTTTTAAGTCCTTCGCGCCATT----GTCTACCCAGaaaaaaaaGACACTGCGCAT 12721 |||||| |||| || | ||||||||| ||| |||||||||| ||||| ||||| || Sbjct 203654 AATACTCTTAAATCTTCCGCGCCATTCATCGTCCACCCAGAAAAGAAAGATACTGCCCAG 203713 Query 12722 GTCTTGTTTGTAAATAACGAACCTTATTTACATAGAAATAGATATACAAACGATAGGTGG 12781 | |||| |||||||| ||||||||| | |||| |||| ||||||| || Sbjct 203714 ATATTGTA-------AACGAACCCTATTTACATTGTTGTAGAAATACTAACGATAAATGA 203766 Query 12782 ATTTTAGTTTATTGCTAATTATAATTAAACTACATTGAATT 12822 ||||||||||||||||||||||||||||||||||||||||| Sbjct 203767 ATTTTAGTTTATTGCTAATTATAATTAAACTACATTGAATT 203807 >seq219 Length=145974 Score = 147 bits (162), Expect = 4e-31 Identities = 123/146 (84%), Gaps = 5/146 (3%) Strand=Plus/Minus Query 9658 TTAAGTCTTTCGCGCCATTGTCTA-CCA--AGAAAAGAAAGATACTGCGTATGTGTTGTA 9714 |||| | |||||| |||||||| | ||| |||||| |||| ||||||| |||| ||||| Sbjct 95541 TTAAATATTTCGCACCATTGTCCATCCAGCAGAAAAAAAAG-TACTGCGCATGTATTGTA 95483 Query 9715 AACGAACTTTATTTACATAGATATAAATACGCAAACGATAAGTAGATTTTACTTTATTGC 9774 || |||| ||||||||||||||||| ||| ||||||| ||| ||||||| |||||||| Sbjct 95482 AAGGAACCTTATTTACATAGATATAGATATACAAACGAGCAGTGGATTTTAGTTTATTGC 95423 Query 9775 TAATTATAATTAAACTACATTGAATT 9800 |||||||||||| | |||||||||| Sbjct 95422 TAATTATAATTACA-AACATTGAATT 95398 Score = 143 bits (158), Expect = 5e-30 Identities = 125/153 (82%), Gaps = 12/153 (8%) Strand=Plus/Minus Query 12673 TTAAGTCCTTCGCGCCATTGTCTACCCAG---aaaaaaaaGACACTGCGCATGTCTTGTT 12729 |||| | ||||| |||||||| | |||| ||||||||| ||||||||||| |||| Sbjct 95541 TTAAATATTTCGCACCATTGTCCATCCAGCAGAAAAAAAAGT-ACTGCGCATGTATTGTA 95483 Query 12730 TGTAAATAACGAACCTTATTTACATAGAAATAGATATACAAACGATAGGTGGATTTTAGT 12789 || |||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 95482 -------AAGGAACCTTATTTACATAGATATAGATATACAAACGAGCAGTGGATTTTAGT 95430 Query 12790 TTATTGCTAATTATAATTAAACTACATTGAATT 12822 ||||||||||||||||||| | |||||||||| Sbjct 95429 TTATTGCTAATTATAATTACA-AACATTGAATT 95398 Score = 98.7 bits (108), Expect = 2e-16 Identities = 90/111 (81%), Gaps = 6/111 (5%) Strand=Plus/Minus Query 12805 ATTAAACTACATTGAATTAG----CAAAATG-TCTTTTAAAAATGTCATAAGTGTTGAAA 12859 |||||| |||||| |||| ||||||| ||||||||||| ||||||||| |||||| Sbjct 95242 ATTAAAATACATTACATTAAAAAACAAAATGATCTTTTAAAAA-GTCATAAGTTTTGAAA 95184 Query 12860 CTAGTATTTTTCTAAGAGATTTGTGTGTAAATATTGTTCTAAAAATGCGAT 12910 ||||| ||||||| || |||| || ||||||||| ||||| || || ||| Sbjct 95183 CTAGTGATTTTCTATGATATTTATGGGTAAATATTATTCTACAAGTGTGAT 95133 >seq2637 Length=90391 Score = 136 bits (150), Expect = 7e-28 Identities = 129/165 (78%), Gaps = 11/165 (7%) Strand=Plus/Plus Query 12825 CAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTGTG 12884 |||||| |||||||||||||||||||||||| |||||||| |||||| | | |||| | Sbjct 82408 CAAAATTTCTTTTAAAAATGTCATAAGTGTTAAAACTAGTGTTTTTCCATAACATTTATA 82467 Query 12885 TGTAAATATTGTTCTAAAAATGCGAT----CATTT-------GATTTTTGTAAGGCGAGA 12933 ||||||| |||||||| || |||||| || | | |||| |||| |||| Sbjct 82468 TGTAAATGTTGTTCTACAATTGCGATAGAAAATATATAAACACAATTTTTTAAGACGAGT 82527 Query 12934 GTAGAGCACTATTTTATTCGCTTCGCTTATGAGGCGTGCAATAAA 12978 ||||||||| || | || |||||||||||||||| |||||| ||| Sbjct 82528 GTAGAGCACAATCTCATCCGCTTCGCTTATGAGGTGTGCAACAAA 82572 >seq1610 Length=20366 Score = 136 bits (150), Expect = 7e-28 Identities = 120/149 (81%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 17197 CAGGAGCGACAAAAGTTCCGTCCGCGTCCATCTCCTTCATCATTAGGTTGGTGTGTTCTT 17256 |||| |||| ||||| ||||||||| || || | |||||||||| ||| ||||||||| Sbjct 960 CAGGGGCGATAAAAGGTCCGTCCGCTTCTATAT---TCATCATTAGTTTGTTGTGTTCTT 1016 Query 17257 GGCGAATGAATTCAATAATTATCTTTTCGTCAATTATTGATGTTAATTCTTCACAATGGC 17316 ||| ||||||||| |||| || |||| |||||||||| || | |||| || ||||| Sbjct 1017 GGCATATGAATTCACTAATGATTTTTTATTCAATTATTGTTGGTGATTCCTCTCAATGCA 1076 Query 17317 GAGTTTTTGCATTCTTAGAACTCATTTTT 17345 | |||||| | || ||||||||||||||| Sbjct 1077 GGGTTTTTACCTTTTTAGAACTCATTTTT 1105 >seq1095 Length=54906 Score = 114 bits (126), Expect = 2e-21 Identities = 138/198 (70%), Gaps = 35/198 (18%) Strand=Plus/Minus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || |||||||||||||||||| ||||| |||||||||||||||| ||||| | Sbjct 29531 ATTTAAAAAGCAAAATGTCTTTTAAAGATGTCGAAAGTGTTGAAACTAGTGTTTTTTCAT 29472 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCG-------------------------- 12908 | |||| ||||||||||| |||||| || |||| Sbjct 29471 CACATTTATGTGTAAATATCGTTCTACAAGTGCGATAGAAAATAAATAGAGACAATTTTA 29412 Query 12909 ---------ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGC 12959 |||| ||||||||||||||||||| ||||||||| | | || | ||| || Sbjct 29411 GTTCAAAAAATCACTTGATTTTTGTAAGGCGAGGGTAGAGCACCACCTCATACACTTTGC 29352 Query 12960 TTATGAGGCGTGCAATAA 12977 |||||||||||||||||| Sbjct 29351 TTATGAGGCGTGCAATAA 29334 >seq473 Length=203971 Score = 111 bits (122), Expect = 3e-20 Identities = 134/188 (71%), Gaps = 31/188 (16%) Strand=Plus/Plus Query 12822 TAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTT 12881 |||||||||||||||| |||||||||||||||| | ||||||| || ||| | || |||| Sbjct 7849 TAGCAAAATGTCTTTTTAAAATGTCATAAGTGT-GCAACTAGTGTTCTTCCATGACATTT 7907 Query 12882 GTGTGTAAATATTGTTCTAAAAATGCGAT------------CATTTGATTTTTG------ 12923 |||||||||||| ||||| || |||||| || |||||||| Sbjct 7908 ATGTGTAAATATTATTCTACAAGTGCGATAGAAAATAAATAGATACGATTTTTGTTCAAA 7967 Query 12924 ------------TAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGCGTG 12971 |||||| |||||||||||||| | | ||||||||| |||||||||| Sbjct 7968 AAATCACTTTTTTAAGGCAAGAGTAGAGCACTACCTCGTGCGCTTCGCTAATGAGGCGTG 8027 Query 12972 CAATAAAC 12979 || |||| Sbjct 8028 CAGAAAAC 8035 >seq4538 Length=93780 Score = 107 bits (118), Expect = 3e-19 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || |||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct 25122 ATTTAAAAAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTATTATTTGTC-AA 25180 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCGAT 12910 | ||| | ||| |||||||||||| || |||||| Sbjct 25181 TACATTAATATGTTAATATTGTTCTACAAGTGCGAT 25216 >seq2327 Length=46413 Score = 105 bits (116), Expect = 1e-18 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || |||| | ||||| ||||||||||||||||||||||||||||| |||||| | Sbjct 34023 ATTTAAAAAGCATAGTGTCTATTAAAAATGTCATAAGTGTTGAAACTAGTGTTTTTCCAT 34082 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCGAT 12910 | |||| | |||||||||||||||| || |||||| Sbjct 34083 TACATTTATATGTAAATATTGTTCTACAAGTGCGAT 34118 >seq1917 Length=53720 Score = 105 bits (116), Expect = 1e-18 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || || | |||||||||| |||||||| ||||||||||||||||| |||||| | Sbjct 42398 ATTAAAAAAGTATAATGTCTTTTTAAAATGTCTTAAGTGTTGAAACTAGTGTTTTTCCAT 42457 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCGAT 12910 | |||| | ||||||||||||||||||| |||||| Sbjct 42458 TACATTTATATGTAAATATTGTTCTAAAAGTGCGAT 42493 >seq1459 Length=119152 Score = 104 bits (114), Expect = 4e-18 Identities = 136/197 (69%), Gaps = 36/197 (18%) Strand=Plus/Minus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || ||||||||||||||||||| | |||||||||||||||||||| | |||| | Sbjct 84807 ATTTAAAAAGCAAAATGTCTTTTAAAA-TATCATAAGTGTTGAAACTAGTGTGTTTCCAT 84749 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCG-------------------------- 12908 | |||| | |||||||||||||||| || |||| Sbjct 84748 TACATTTATATGTAAATATTGTTCTACAAGTGCGATAGAATATAAATAGAGACAATTTTA 84689 Query 12909 ---------ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGC 12959 ||| ||||||||||||||| ||| |||||| | | || || |||||||| Sbjct 84688 GTTCAAGAAATCGCTTGATTTTTGTAAGGTGAGTGTAGAGTAGAACTTCATCCGCTTCGC 84629 Query 12960 TTATGAGGCGTGCAATA 12976 ||||||||||| ||||| Sbjct 84628 TTATGAGGCGTCCAATA 84612 Score = 104 bits (114), Expect = 4e-18 Identities = 136/197 (69%), Gaps = 36/197 (18%) Strand=Plus/Minus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || ||||||||||||||||||| | |||||||||||||||||||| | |||| | Sbjct 85557 ATTTAAAAAGCAAAATGTCTTTTAAAA-TATCATAAGTGTTGAAACTAGTGTGTTTCCAT 85499 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCG-------------------------- 12908 | |||| | |||||||||||||||| || |||| Sbjct 85498 TACATTTATATGTAAATATTGTTCTACAAGTGCGATAGAATATAAATAGAGACAATTTTA 85439 Query 12909 ---------ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGC 12959 ||| ||||||||||||||| ||| |||||| | | || || |||||||| Sbjct 85438 GTTCAAGAAATCGCTTGATTTTTGTAAGGTGAGTGTAGAGTAGAACTTCATCCGCTTCGC 85379 Query 12960 TTATGAGGCGTGCAATA 12976 ||||||||||| ||||| Sbjct 85378 TTATGAGGCGTCCAATA 85362 >seq4336 Length=121480 Score = 102 bits (112), Expect = 1e-17 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || ||||||| ||||||||||||||||||||||||| |||||||| ||||| | Sbjct 102155 ATTTAAGAAGCAAAA-GTCTTTTAAAAATGTCATAAGTGTTAAAACTAGTGTTTTTTCAT 102213 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCGAT 12910 | |||| | || ||||||||||||| ||||||||| Sbjct 102214 TACATTTATATGAAAATATTGTTCTACAAATGCGAT 102249 >seq912 Length=269948 Score = 102 bits (112), Expect = 1e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 12825 CAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTGTG 12884 ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| | Sbjct 229373 CAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCCACAACCTTTATA 229314 Query 12885 TGTAAATATTGTTCTAAAA 12903 ||||||||| |||||| || Sbjct 229313 TGTAAATATAGTTCTACAA 229295 >seq67 Length=120335 Score = 102 bits (112), Expect = 1e-17 Identities = 135/197 (69%), Gaps = 34/197 (17%) Strand=Plus/Minus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || |||||||| |||||| ||||| | |||| ||||||||||||| |||||| | Sbjct 86478 ATTTAAAAAGCAAAATATCTTTTTAAAATATTATAACTGTTGAAACTAGTGTTTTTCCAT 86419 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCG-------------------------- 12908 | ||| | |||||||||||||||| || |||| Sbjct 86418 TACATTCATATGTAAATATTGTTCTACAAGTGCGATAGAAAAAAATAGAGACAATTTTAG 86359 Query 12909 --------ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCT 12960 |||| |||||| |||||| ||||| ||||||||| | || || |||| | || Sbjct 86358 TTAAAGAAATCACTTGATTATTGTAAAGCGAGTGTAGAGCACAACTTCATCCGCTACCCT 86299 Query 12961 TATGAGGCGTGCAATAA 12977 ||||||||||||||||| Sbjct 86298 TATGAGGCGTGCAATAA 86282 >seq30 Length=164007 Score = 102 bits (112), Expect = 1e-17 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 12825 CAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTGTG 12884 |||| |||||||||| ||||||||||||||| ||||||||||||||| | | |||| | Sbjct 750 CAAAGTGTCTTTTAAGAATGTCATAAGTGTTAAAACTAGTATTTTTCCATTACATTTATA 691 Query 12885 TGTAAATATTGTTCTAAAAATGCGAT 12910 ||||||||||||||| || |||||| Sbjct 690 TGTAAATATTGTTCTCTAAGTGCGAT 665 >seq1739 Length=93149 Score = 100 bits (110), Expect = 5e-17 Identities = 78/95 (82%), Gaps = 10/95 (11%) Strand=Plus/Minus Query 12740 GAACCTTATTTACATAGAAATAGATATACAAACGATAGGTGGATTTTAGTTTATTGCT-- 12797 |||||||||||||||| | ||||||||||| || ||| |||||||||||||||||| | Sbjct 66637 GAACCTTATTTACATAAATATAGATATACAGACAATAAGTGGATTTTAGTTTATTGTTAA 66578 Query 12798 --------AATTATAATTAAACTACATTGAATTAG 12824 |||||||||||||||||| |||||||| Sbjct 66577 TAATTAGGAATTATAATTAAACTACACTGAATTAG 66543 Score = 89.7 bits (98), Expect = 9e-14 Identities = 177/269 (66%), Gaps = 56/269 (21%) Strand=Plus/Minus Query 9572 TCAAAAAAGTTTGAAAAATCCAAAAGTGCACGCCTCATAATTTAATTTTCCATAATAAAA 9631 ||| |||||| || ||||||||||| ||||||||||||||| | ||||| || || ||| Sbjct 66793 TCACAAAAGTATGGAAAATCCAAAATTGCACGCCTCATAATCTTATTTTTCACTATTAAA 66734 Query 9632 TTGATTG----------AAATAAAATACAAATACTT-----------------TTAAGTC 9664 ||| ||| || | ||| |||| || |||| || Sbjct 66733 TTGGTTGCTTTATTGCGAACTTAAAACGAAATTTTTAGTTCTATGATTTTTTTTTAAATC 66674 Query 9665 TTTCG-CGCCATTGTCTACCAAGAAAAGAAAGATACTGCGTATGTGTTGTAAACGAACTT 9723 ||| |||||||||| ||| |||||||| || || | |||| | Sbjct 66673 TTTTTACGCCATTGTCCACCCAGAAAAGAC-----CT------------TAGA-GAACCT 66632 Query 9724 TATTTACATAGATATAAATACGCAAACGATAAGTAGATTTTACTTTATTGCT-------- 9775 |||||||||| ||||| ||| || || |||||| ||||||| ||||||| | Sbjct 66631 TATTTACATAAATATAGATATACAGACAATAAGTGGATTTTAGTTTATTGTTAATAATTA 66572 Query 9776 --AATTATAATTAAACTACATTGAATTAG 9802 |||||||||||||||||| |||||||| Sbjct 66571 GGAATTATAATTAAACTACACTGAATTAG 66543 >seq399 Length=97250 Score = 100 bits (110), Expect = 5e-17 Identities = 129/188 (69%), Gaps = 35/188 (19%) Strand=Plus/Minus Query 12826 AAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTGTGT 12885 ||||||||||||||||||||||||||| |||||| |||| |||||| | | |||| | | Sbjct 35251 AAAATGTCTTTTAAAAATGTCATAAGTATTGAAATTAGTGTTTTTCCATTACATTTATAT 35192 Query 12886 GTAAATATTGTTCTAAAAATGCG-----------------------------------AT 12910 |||||||||||||| || |||| || Sbjct 35191 GTAAATATTGTTCTGCAAGTGCGATAGAAAATAAATAGAGACAATTTTAGTTCAAGAAAT 35132 Query 12911 CATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGCGT 12970 | ||| |||||||||||||||| ||||||||| | || | ||||||||||| ||||| Sbjct 35131 CGTTTTATTTTTGTAAGGCGAGTGTAGAGCACAGCCTCATCCACTTCGCTTATGGGGCGT 35072 Query 12971 GCAATAAA 12978 ||||| || Sbjct 35071 GCAATGAA 35064 >seq2741 Length=26613 Score = 96.9 bits (106), Expect = 6e-16 Identities = 133/194 (69%), Gaps = 33/194 (17%) Strand=Plus/Minus Query 12823 AGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTG 12882 || |||||||||||||||||||||| |||||| ||||||||| |||||| | ||| Sbjct 9028 AGGAAAATGTCTTTTAAAAATGTCACAAGTGTAGAAACTAGTGTTTTTCCATTGTGTTTA 8969 Query 12883 TGTGTAAATATTGTTCTAAAAATGCGAT-----------------CATT----------- 12914 | ||||||||||| ||| || |||||| ||| Sbjct 8968 TATGTAAATATTGCTCTGCAAGTGCGATAGAAAATAAATAAAGAGAATTTAAGTTCAACA 8909 Query 12915 -----TGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGCG 12969 | |||||||||||||||| ||||||||| || | |||||||||||||||||| Sbjct 8908 ATGCCTAATTTTTGTAAGGCGAGTGTAGAGCACAATCTCTACCGCTTCGCTTATGAGGCG 8849 Query 12970 TGCAATAAACTTCT 12983 ||||| || || || Sbjct 8848 TGCAAAAAGCTACT 8835 >seq2672 Length=92948 Score = 95.1 bits (104), Expect = 2e-15 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || |||||||| ||||||| |||||||||||||||||||||||| |||||| | Sbjct 65588 ATTTAAAAAGCAAAATTTCTTTTATTAATGTCATAAGTGTTGAAACTAGTTTTTTTCCAT 65529 Query 12875 GAGATTTGTGTGTAAATATTGTTCT 12899 | |||| | ||||||||||||||| Sbjct 65528 TACATTTATATGTAAATATTGTTCT 65504 >seq1656 Length=85281 Score = 95.1 bits (104), Expect = 2e-15 Identities = 72/85 (85%), Gaps = 4/85 (5%) Strand=Plus/Minus Query 12823 AGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTG 12882 |||||||||||||||||||||||||||||||||||||||||| ||||| | | ||| Sbjct 41457 AGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTGTTTTTTCAGTACATT-- 41400 Query 12883 TGTGTAAATATTGTTCTAAAAATGC 12907 | |||||||||||||| || ||| Sbjct 41399 --TATAAATATTGTTCTACAAGTGC 41377 >seq1502 Length=97700 Score = 95.1 bits (104), Expect = 2e-15 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 9649 CAAATACTTTTAAGTCTTTCGCGCCATTGTCTACCAAGAAAAGAAAGATACTGCGTATGT 9708 ||||| |||||| ||||||||| |||||| || |||||||||||||||||| || Sbjct 9742 CAAATTTTTTTAAATCTTTCGCGTCATTGTTCACACTGAAAAGAAAGATACTGCGCATCA 9801 Query 9709 GTTGTAAACGAACTTTATTTACATAGATATAAATA 9743 ||| |||||||| |||||||||||||| || ||| Sbjct 9802 ATTGGAAACGAACCTTATTTACATAGATGTAGATA 9836 >seq8260 Length=306244 Score = 91.5 bits (100), Expect = 3e-14 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 12909 ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGC 12968 ||| |||||||||||||||||||| ||||||||| | | || ||||||||||||||||| Sbjct 34652 ATCGTTTGATTTTTGTAAGGCGAGTGTAGAGCACAACCTCATCCGCTTCGCTTATGAGGC 34711 Query 12969 GTGCAATA 12976 |||||||| Sbjct 34712 GTGCAATA 34719 >seq907 Length=203647 Score = 91.5 bits (100), Expect = 3e-14 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 12816 TTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAG 12875 || || |||||||||||||| ||||||||| |||||||| |||||||| ||||| | Sbjct 183612 TTAAAATAGCAAAATGTCTTCTAAAAATGTACTAAGTGTTAAAACTAGTGTTTTTGCATT 183553 Query 12876 AGATTTGTGTGTAAATATTGTTCTAAAAATGCGAT 12910 | |||| |||||||||||||||| || || ||| Sbjct 183552 ACATTTACATGTAAATATTGTTCTACAAGTGTGAT 183518 >seq446 Length=86760 Score = 91.5 bits (100), Expect = 3e-14 Identities = 146/214 (68%), Gaps = 38/214 (18%) Strand=Plus/Minus Query 12798 AATTATAATTAAACTACAT-TG-AATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTT 12855 ||| |||| |||| || | || || ||||||||| ||||| ||||| ||||||||||| Sbjct 78808 AATAATAAATAAATTATTTATGTAAAAAGCAAAATG-CTTTTGAAAATTTCATAAGTGTT 78750 Query 12856 GAAACTAGTATTTTTCTAAGAGATTTGTGTGTAAATATTGTTCTAAAAATGCGAT----- 12910 |||||||| ||||| | | |||| | |||||||||||||| | | |||||| Sbjct 78749 GAAACTAGGGTTTTTACATTATATTTATATGTAAATATTGTTCAACGAGTGCGATAGAAA 78690 Query 12911 -----------CATTT-------------------GATTTTTGTAAGGCGAGAGTAGAGC 12940 || || |||||||||||| ||| ||||||| Sbjct 78689 ATAAATGGAGACAATTTTTGCTCAAGAAATCGCTCGATTTTTGTAAGTCGACTGTAGAGC 78630 Query 12941 ACTATTTTATTCGCTTCGCTTATGAGGCGTGCAA 12974 || | | |||||||||||||||||||||||||| Sbjct 78629 ACAACCTCATTCGCTTCGCTTATGAGGCGTGCAA 78596 >seq6363 Length=12013 Score = 89.7 bits (98), Expect = 9e-14 Identities = 126/182 (69%), Gaps = 34/182 (19%) Strand=Plus/Minus Query 12825 CAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTGTG 12884 |||||||||||| || | ||||||||| ||||||||||||||||| | | | |||| | Sbjct 2735 CAAAATGTCTTTAAACAGTGTCATAAGAGTTGAAACTAGTATTTTGCCATTAAATTTATA 2676 Query 12885 TGTAAA-TATTGTTCTAAAAATGCGAT-------------CAT----------------- 12913 |||||| ||||||| || || |||||| ||| Sbjct 2675 TGTAAATTATTGTTGTACAATTGCGATATATAAATAAAGACATTTTTGTTCAAGGAATCG 2616 Query 12914 -TTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGCGTGC 12972 |||||||||||||| ||| |||||| || | | || |||||||||||||||||||| Sbjct 2615 CTTGATTTTTGTAAG--GAGTGTAGAGTACAACCTCATCCGCTTCGCTTATGAGGCGTGA 2558 Query 12973 AA 12974 || Sbjct 2557 AA 2556 >seq2083 Length=80993 Score = 89.7 bits (98), Expect = 9e-14 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 12788 GTTTATTGCTAATTATAATTAAACTACATTGAATTAGCAAAATGTCTTTTAAAAATGTCA 12847 |||| || ||| | | ||||| || || || ||||| | |||||| |||||||| Sbjct 72250 GTTTTTTTTTAAATTTTTTTAAAATA--TTTAAAAAGCAAGACATCTTTTTAAAATGTCC 72193 Query 12848 TAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTGTGTGTAAATATTGTTCTAAAAATGC 12907 ||||||||| ||||||| |||||| | | |||| | |||||||||||| ||| || ||| Sbjct 72192 TAAGTGTTGCAACTAGTGTTTTTCCATTACATTTATATGTAAATATTGTACTACAAGTGC 72133 Query 12908 GAT 12910 ||| Sbjct 72132 GAT 72130 >seq710 Length=445108 Score = 89.7 bits (98), Expect = 9e-14 Identities = 134/198 (68%), Gaps = 37/198 (19%) Strand=Plus/Plus Query 12815 ATTGAATTAGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAA 12874 ||| || |||||||||||||||||||||||| | |||||||| ||||| |||||| | Sbjct 212286 ATTTAAAAAGCAAAATGTCTTTTAAAAATGTCGT--GTGTTGAAGCTAGTGTTTTTCCAT 212343 Query 12875 GAGATTTGTGTGTAAATATTGTTCTAAAAATGCGA------------------------- 12909 | || | | ||||||||||||| || || | ||| Sbjct 212344 TATATATATATGTAAATATTGTTTTACAAGTACGATAGAAAATAAATTGAGAAAATTTTA 212403 Query 12910 --TCA--------TTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGC 12959 ||| || |||||||||||||||| ||||||||| | | | || ||||| Sbjct 212404 GTTCAAGAAATGGCTTAATTTTTGTAAGGCGAGTGTAGAGCACAACCTCGTCCGTTTCGC 212463 Query 12960 TTATGAGGCGTGCAATAA 12977 |||||||||||||||||| Sbjct 212464 TTATGAGGCGTGCAATAA 212481 >seq1173 Length=611770 Score = 87.8 bits (96), Expect = 3e-13 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 12909 ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGC 12968 |||| |||||||||||||| |||||||||||||||| | || |||||| ||||||||| Sbjct 291159 ATCACTTGATTTTTGTAAGACGAGAGTAGAGCACTACCTCATGTGCTTCGTTTATGAGGC 291218 Query 12969 GTGCAATA 12976 |||||||| Sbjct 291219 GTGCAATA 291226 >seq3484 Length=22881 Score = 86.0 bits (94), Expect = 1e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 12909 ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGC 12968 ||| |||||| ||||||||||||| ||||||||| | |||| |||||||||||||||| Sbjct 6864 ATCGTTTGATCTTTGTAAGGCGAGTGTAGAGCACAACCTTATCAGCTTCGCTTATGAGGC 6805 Query 12969 GTGCAATAAA 12978 ||||||||| Sbjct 6804 TTGCAATAAA 6795 >seq1427 Length=161467 Score = 86.0 bits (94), Expect = 1e-12 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 2321 AAAAAAGTTTGAAAAATCCAAAAGTGCACGCCTCATAATCTCATTTTTTA 2370 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 72228 AAAAAAGTTTGGAAAATCCAAAAGTGCACGCCTCATAATCTCATTTTTTA 72277 Score = 82.4 bits (90), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 9569 TTATC-AAAAAAGTTTGAAAAATCCAAAAGTGCACGCCTCATAATTTAATTTTCCATAAT 9627 ||||| ||||||||||| ||||||||||||||||||||||||||| | ||||| | | | Sbjct 72222 TTATCCAAAAAAGTTTGGAAAATCCAAAAGTGCACGCCTCATAATCTCATTTTTTACAGT 72281 Query 9628 AAAATTGATT 9637 ||||||||| Sbjct 72282 TAAATTGATT 72291 >seq5705 Length=22589 Score = 84.2 bits (92), Expect = 4e-12 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 12909 ATCATTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGC 12968 |||| ||||||||||||||||||| ||||||||| | | || | ||| ||||||||||| Sbjct 13269 ATCACTTGATTTTTGTAAGGCGAGGGTAGAGCACCACCTCATACACTTTGCTTATGAGGC 13328 Query 12969 GTGCAATAA 12977 ||||||||| Sbjct 13329 GTGCAATAA 13337 >seq1726 Length=198282 Score = 84.2 bits (92), Expect = 4e-12 Identities = 72/88 (82%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 12823 AGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTTTCTAAGAGATTTG 12882 ||||||| ||||||||||||| ||| |||| |||||||| |||||||| | ||| Sbjct 39286 AGCAAAAAGTCTTTTAAAAATTATATACATGTTAAAACTAGTGTTTTTCTATTACATT-- 39229 Query 12883 TGTGTAAATATTGTTCTAAAAATGCGAT 12910 | |||||||||||||||| || |||||| Sbjct 39228 TATGTAAATATTGTTCTACAAGTGCGAT 39201 >seq343 Length=192774 Score = 84.2 bits (92), Expect = 4e-12 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 12914 TTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGCGTGCA 12973 ||||||||||||||||||| ||||||||| | | || |||||||||||||||||||||| Sbjct 25354 TTGATTTTTGTAAGGCGAGTGTAGAGCACAACCTCATCCGCTTCGCTTATGAGGCGTGCA 25413 Query 12974 A 12974 | Sbjct 25414 A 25414 >seq1505 Length=55655 Score = 82.4 bits (90), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 9552 TAtttttttttCAGTAGTTATCAAAAAAGTTTGAAAAATCCAAAAGTGCACGCCTCATAA 9611 |||||| | || ||| || ||||||||||| ||||||||| ||||||||||||||| Sbjct 21527 TATTTTATATTAGGTATATAGAAAAAAAGTTTGCAAAATCCAA--GTGCACGCCTCATAA 21584 Query 9612 TTTAATTTTCCATAATAAAATTGATTG 9638 | || |||| || ||| |||||||||| Sbjct 21585 TCTACTTTTTCACAATTAAATTGATTG 21611 >seq2062 Length=113148 Score = 80.6 bits (88), Expect = 5e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 12913 TTTGATTTTTGTAAGGCGAGAGTAGAGCACTATTTTATTCGCTTCGCTTATGAGGCGTGC 12972 |||||||| |||| |||||||||||||||||| |||| | ||||||||||||||||| | Sbjct 46567 TTTGATTTCTGTAGGGCGAGAGTAGAGCACTACCTTATGCACTTCGCTTATGAGGCGTAC 46508 Query 12973 AA 12974 || Sbjct 46507 AA 46506 >seq1166 Length=99387 Score = 80.6 bits (88), Expect = 5e-11 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 12823 AGCAAAATGTCTTTTAAAAATGTCATAAGTGTTGAAACTAGTATTTT 12869 |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 38466 AGCAAAATGTCTTTTAAAAATGCCATAAGTGTTGAAACTAGTATTTT 38420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 87380452812987