Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq448 462 2e-126 seq1125 340 2e-89 seq1384 257 2e-64 seq5058 248 9e-62 seq1149 244 1e-60 seq8255 188 7e-44 seq1477 185 9e-43 seq941 185 9e-43 seq6172 116 4e-22 seq4433 89.7 5e-14 seq1983 78.8 9e-11 >seq448 Length=63816 Score = 462 bits (512), Expect = 2e-126 Identities = 448/568 (79%), Gaps = 7/568 (1%) Strand=Plus/Minus Query 369 ACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCCGTA 428 |||||||||| || ||||| |||| | | |||||||||||| | ||||||||||| Sbjct 44683 ACCCACTAAAAA--AACCCCCTCGCTCTCC-AGCCTCTGATCCCC-ACGGTACCGCCGTT 44628 Query 429 AGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATGT 488 ||||||| |||||| |||||||||| |||||||||||||||||| ||| |||||| | Sbjct 44627 AGGCATTACTTCGCAGGGGGAGGAACCAGCTGCCGCTCTTCCTTCAGGTACGTAAGATAT 44568 Query 489 TATTTCTTCCTTCTAGTTTCTGTCATTCGCTCTTT-TCTTCTCAATGGATTGCAACTCGG 547 ||| ||| | || ||| ||||||| || ||||| | |||| || ||||| |||| |||| Sbjct 44567 TATATCT-CTTTTTAGCTTCTGTCTTTTGCTCTCTCTCTT-TCTATGGAACGCAAGTCGG 44510 Query 548 TAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACAGCATTG 607 | || || | |||| |||| || || | |||||||| ||||| || | |||| ||||| Sbjct 44509 TGAGGACCTCTGTAACAAACGTACTGATAGCGTTCCAAGCAGCCTCGGTGGACAACATTG 44450 Query 608 CTGCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTCATCCCGAT 667 | |||| |||||||||||||| ||| | ||| ||||||| | ||| || | Sbjct 44449 CCAACACTACAGTCTCTGGTTGGATTCTCCGGCCGATGATGCTCTCCAGTTTATCACGCT 44390 Query 668 GTGGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGC 727 | |||| | |||| ||| |||||||||||||||| ||||| ||| ||||||| ||| Sbjct 44389 GAGGGTTGTACCGTGGACACACAAAGAAAACGTGCTCCGCATCCTCAATGACTCCCAGGC 44330 Query 728 AGGATGGGCACTCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGC 787 | || |||||||| || |||| ||| || ||| |||| ||||| || ||||| || |||| Sbjct 44329 AAGACGGGCACTCCGGAGAATCATCGTGTTTGAAGCGATGGAGGTAAGCCCGAAAGCAGC 44270 Query 788 CGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCC 847 | ||||| ||||||||||||||||| || ||||||||||| || ||||||||||| |||| Sbjct 44269 CATGTCCCGATAACATCTGTGTAAGGTAGTAGTTGACCTCGCCATGACTCCGGTTCAGCC 44210 Query 848 AAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACT 907 ||| || |||||| ||||||||||| |||||||| ||| | || |||| ||||||||||| Sbjct 44209 AAATGTCGATCCTCGGTATGAGACGGTGCGTCCACCTATCCTTAACTGCGGCATCCCACT 44150 Query 908 GTAGTTGCCATCGACTTATGCTCCTCCG 935 || |||||||||| |||||| |||| Sbjct 44149 GTTGTTGCCATCGGGCTATGCTGTTCCG 44122 >seq1125 Length=62062 Score = 340 bits (376), Expect = 2e-89 Identities = 256/301 (85%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 5127 CCGAACACGCATGATCATCTAAATCAGGCCTTATATTAGAGCCAACATTATTAGAAGCCT 5186 ||| ||||||| | |||||||| || ||||| | ||||||||||||| || | ||||||| Sbjct 59916 CCGCACACGCACGGTCATCTAACTCTGGCCTCACATTAGAGCCAACAGTACTTGAAGCCT 59857 Query 5187 GCGCTTTCTCACTCATTGATGAACAAACACTCAGTGCATTTCTGTTAAAGACTTGTGGTA 5246 || | |||||||| |||||||||||||||||||||||||||||||| || |||| || || Sbjct 59856 GCTCCTTCTCACTTATTGATGAACAAACACTCAGTGCATTTCTGTTGAATACTTCTGTTA 59797 Query 5247 ATAATCGTCGAGCTAATGATTTGCAATCTTTCGATACTTGCTGACAGTATTTGAGGTCTC 5306 ||| |||||||||||||||||||||||||| |||| |||| ||| |||| ||| |||| Sbjct 59796 ATAGTCGTCGAGCTAATGATTTGCAATCTTCTGATATTTGCAGACGGTATGCGAGTTCTC 59737 Query 5307 CGCAGCTGACGTAAACACCACTTTGGGGCATAAGTTCTACGAGTCCCGGCAGATTTGATC 5366 | |||||| ||||||||||| || || ||||||||||||||||| ||||||||| | Sbjct 59736 CTTGGCTGACATAAACACCACTATGAGGTATAAGTTCTACGAGTCCTGGCAGATTTTTGC 59677 Query 5367 GATACTTTAATGTCCATCTTGTATCATAAGCATCATATTCCGGTGGTAGAACGAACCGGT 5426 | ||||| |||||||| ||||||||||| |||||||| ||||| |||||||| || |||| Sbjct 59676 GGTACTTCAATGTCCACCTTGTATCATACGCATCATACTCCGGCGGTAGAACAAATCGGT 59617 Query 5427 A 5427 | Sbjct 59616 A 59616 Score = 302 bits (334), Expect = 5e-78 Identities = 349/464 (75%), Gaps = 21/464 (5%) Strand=Plus/Minus Query 6906 GTCCGTAATCATTTCTCGTAGCGATCCAAAATTCTGCATCACTGTAAGAATCTGaaaaaa 6965 |||| |||| ||||| |||| ||||||| ||||||||||||||||||||||||||| || Sbjct 59609 GTCCACAATCTTTTCTTGTAGTGATCCAAGATTCTGCATCACTGTAAGAATCTGAAACAA 59550 Query 6966 aTATATCAACATTATTATCTTTTAATTTATGAGAAGTTCTGAATCTGAATAGATTTCAAT 7025 | ||||||| |||||| || |||||| | | || ||||| |||||||| | | ||| | Sbjct 59549 ACATATCAATATTATTTTC-ATTAATTCAAGGGACGTTCTAAATCTGAAAATACTTCTAC 59491 Query 7026 GATA-TAACGTACGATTTATTAACTAATACATTTACTAAAACTCACTTGATTCATATTTG 7084 |||| |||| ||| || ||||||| ||||| | | ||||||| ||||| ||||||| Sbjct 59490 GATACCAACGCCTGATCTAATAACTAACACATTCATTCTAACTCACCTGATTTATATTTG 59431 Query 7085 ACAGAGGCCATATA-AAATCTCCACTCATCATTGTATCTCTCTTTCCTCTCCGCGCGATC 7143 ||| ||||| ||| |||| ||||| | ||||||| | |||||||||| | ||| || Sbjct 59430 ACAATGGCCACATACCAATC-GCACTCTTTATTGTATTTGTCTTTCCTCTTCACGCTTTC 59372 Query 7144 TCTTGTATCAAAAGGATCTTCGTTTTTAGGGTACGCAACGAC--------GGCCC----- 7190 | ||||| | | | |||||| | ||| |||| | |||| | ||||| Sbjct 59371 TTTTGTAATAGATGCATCTTCTGTATTA-GGTATGTAACGGCTGCCATTGGGCCCATCAT 59313 Query 7191 --TCTGATCCGTCGCTTTACGTACTATCAGCCACGTGTTTGGCACGCATACGTAATCATC 7248 || ||| | || |||| || ||||||||| ||||| ||||| |||| || ||| Sbjct 59312 TGACTCATCTGCCGGTTTAGATAGTATCAGCCAGGTGTTCGGCACAACCACGTCATTATC 59253 Query 7249 AATACCTTCAAAAGGCAATTCTATGAATTGAACAACACAGAATGCTCGTTCGTTTTCACT 7308 ||||| ||||||||||| | ||||||||| |||| |||||||||| || | ||| | Sbjct 59252 AATACAATCAAAAGGCAAGCATTTGAATTGAAGAACATAGAATGCTCGCTCATCATCATT 59193 Query 7309 TTTACGTGTCATCTGAAACAATAAAAAATACTT-CCGTTAATAT 7351 | || |||||||||||||||| ||||| |||| |||| ||||| Sbjct 59192 TATATTTGTCATCTGAAACAATCAAAAACACTTACCGTAAATAT 59149 >seq1384 Length=360384 Score = 257 bits (284), Expect = 2e-64 Identities = 295/386 (76%), Gaps = 13/386 (3%) Strand=Plus/Minus Query 367 CTACCCACTAAACCCTAAACC-CCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCC 425 ||||||||||||| ||||| ||| |||| ||| |||||||||||| ||||||||||| Sbjct 320725 CTACCCACTAAAC---AAACCTCCTCGCTCT-CTAGCCTCTGATCCCC-ATGGTACCGCC 320671 Query 426 GTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGA 485 || ||||||| |||||| ||||||| || |||||||||||||||||| ||| | ||||| Sbjct 320670 GTGAGGCATTACTTCGCAGGGGGAGAAACCAGCTGCCGCTCTTCCTTCAGGTAGGTAAGA 320611 Query 486 TGTTATTTC---TTCCTTCTAGTTTCTGTCATTCGCTCTTT-TCTTCTCAATGGATTGCA 541 | |||| || || |||||| | |||| || ||||| |||| || ||||| || Sbjct 320610 TCTTATCTCACTTTTTTTCTAGCTATTGTCTTTTGCTCTCGCTCTT-TCTATGGAACACA 320552 Query 542 ACTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACA 601 | || | | || | ||||||||| ||||| | |||||||| ||||| || | ||||| Sbjct 320551 AGTCATTGATGACCTCTGTAGCAAACGTGCTGATAGCGTTCCAAGCAGCCTCGGTTGACA 320492 Query 602 GCATTGCTGCTACTATTATCTCTGGTTGGATTTTCCTCTTC-AGGATATTCTCCAGCTCA 660 |||||| | ||| |||||||||||||| | || | ||||| | ||||| ||| Sbjct 320491 ACATTGCCTCCACTGCAGTCTCTGGTTGGATTCTG-TCGCCGAGGATGCTATCCAGTTCA 320433 Query 661 TCCCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACT 720 || || || |||| | || || || |||||||||||||||||||||| ||| | ||| Sbjct 320432 TCACGCTGAGGGTTGATCCGCGAAGACACAAAGAAAACGTGCTCTGCATCCTCAGTAACT 320373 Query 721 CCTGGGCAGGATGGGCACTCTGGGGA 746 || ||||| | ||||||||||| || Sbjct 320372 CCCGGGCAAGTCGGGCACTCTGGAGA 320347 >seq5058 Length=44902 Score = 248 bits (274), Expect = 9e-62 Identities = 294/392 (75%), Gaps = 11/392 (3%) Strand=Plus/Plus Query 367 CTACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCCG 426 ||||| ||||| | || ||||| |||| | | |||||||||||| | |||||||||| Sbjct 43390 CTACCACCTAAAAC--AACCCCCTCGCTCTCCAA-CCTCTGATCCCC-ACGGTACCGCCG 43445 Query 427 TAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGAT 486 | ||||||| |||||| |||||||||| |||||||||||||||||| ||| |||||| Sbjct 43446 TTAGGCATTACTTCGCAGGGGGAGGAACCAGCTGCCGCTCTTCCTTCAGGTACGTAAGAT 43505 Query 487 GTTATTTCT---TCCTTCTAGTTTCTGTCATTCGCTCTTT---TCT-TCTCAATGGATTG 539 |||| | | || || ||| | ||||| || ||||| | ||| | || ||||| | Sbjct 43506 CTTATATATCTTTCTTTTTAGCTACTGTCTTTTGCTCTCTCTCTCTCTTTCTATGGAACG 43565 Query 540 CAACTCGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGA 599 ||| ||||| || || | ||||||||| ||||| | |||||||| ||||| || | || Sbjct 43566 CAAGTCGGTGAGGACCTCTGTAGCAAACGTGCTGATAGCGTTCCAAGCAGCCTCGGTGGA 43625 Query 600 CAGCATTGCTGCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTC 659 || |||||| | |||| ||||| |||||||| ||| ||| | ||||||| | Sbjct 43626 CAACATTGCCTCCACTACAGTCTCTTGTTGGATTCTCCGGCCGAGGGTGCTCTCCAGTTT 43685 Query 660 ATCCCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGAC 719 ||| || || |||| || || ||| || |||||||||||||||| ||||||||| |||| Sbjct 43686 ATCACGCTGAGGGTTGAACCGCGAGAACACAAAGAAAACGTGCTCCGCATCTTCAGTGAC 43745 Query 720 TCCTGGGCAGGATGGGCACTCTGGGGAATTAT 751 | | |||| |||| |||| || ||| || Sbjct 43746 TTCCAGGCAAGATGCAAACTCCGGATAATGAT 43777 >seq1149 Length=190543 Score = 244 bits (270), Expect = 1e-60 Identities = 288/382 (75%), Gaps = 7/382 (2%) Strand=Plus/Plus Query 369 ACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCCGTA 428 |||||||||| || ||||| |||| | | |||||||||||| | ||||||||||| Sbjct 28140 ACCCACTAAAAA--AACCCCCTCGCTCTCC-AGCCTCTGATCCCC-ACGGTACCGCCGTT 28195 Query 429 AGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATGT 488 ||||||| |||||| |||||||||| |||||||||||||||||| ||| |||||| | Sbjct 28196 AGGCATTACTTCGCAGGGGGAGGAACCAGCTGCCGCTCTTCCTTCAGGTACGTAAGATCT 28255 Query 489 TATTTCTTCCTTCTAGTTTCTGTCATTCGCTCTTT-TCTTCTCAATGGATTGCAACTCGG 547 ||| ||| | || ||| | ||||| || ||||| | |||| || ||||| |||| |||| Sbjct 28256 TATATCT-CTTTTTAGCTACTGTCTTTTGCTCTCTCTCTT-TCTATGGAACGCAAGTCGG 28313 Query 548 TAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACAGCATTG 607 | || || | |||| |||| || || | |||||||| ||||| || | |||| ||||| Sbjct 28314 TGAGGACCTCTGTAACAAACGTACTGATAGCGTTCCAAGCAGCCTCGGTGGACAACATTG 28373 Query 608 CTGCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTCATCCCGAT 667 | |||| |||||||||||||| ||| || | ||||||| | ||| || | Sbjct 28374 CCAACACTACAGTCTCTGGTTGGATTCTCCGGCCGAGAACGCTCTCCAGTTTATCACGCT 28433 Query 668 GTGGGTAAAAACGTGAGCACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGC 727 | |||| | |||| ||| |||||||||||||||| ||||||||| ||||| | ||| Sbjct 28434 GAGGGTTGTACCGTGGACACACAAAGAAAACGTGCTCCGCATCTTCAGTGACTTCCAGGC 28493 Query 728 AGGATGGGCACTCTGGGGAATT 749 | |||| |||| || |||| Sbjct 28494 AAGATGCAAACTCCGGATAATT 28515 >seq8255 Length=1502 Score = 188 bits (208), Expect = 7e-44 Identities = 367/531 (69%), Gaps = 21/531 (4%) Strand=Plus/Plus Query 401 TCCTCTGATCCCCCATGGTACCGCCGTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTG 460 |||||| ||||||| || ||||||| ||||||| ||||| || |||||| |||| Sbjct 20 TCCTCT--TCCCCCACGGAACCGCCGCTAGGCATTACTTCGTGGAGGGAGGCTCCAGCTA 77 Query 461 CCGCTCTTCCTTCTGGTGGCTAAGATGTTATTTCTTCCTTCTAGTTTCTGTCATTCGCTC 520 | |||||||| || | || ||||| | || || | |||| | | |||| Sbjct 78 CTGCTCTTCCGTCATG---CT--GATGTCACGGGTT--TTGT--TTTCCGAC---CGCT- 124 Query 521 TTTTCTTCTCAATGGATTGCAACTCGGTAAGCACTTTTGTAGC-AAAAGTGCTTGTGGCG 579 ||||| ||| || | | ||| ||| |||| || || ||||| |||||| || Sbjct 125 --TTCTTTCCAACCGACGG-AGCTCCTGAAGAACTTCCGTCGCGAAAAGCGCTTGTCGCC 181 Query 580 TTCCAGGCAGCTTCTGATGACAGCATTGCTGCTACTATTATCTCTGGTTGGATTTTCCTC 639 | ||| || || || || || ||||| ||| ||| | |||||| || |||||| || Sbjct 182 TGCCATGCTGCCTCCGACGATAGCATAGCTTCTATCAGAGACTCTGGCTGAATTTTCTTC 241 Query 640 TTCAGGATAT-TCTCCAGCTCATCCCGATGTGGGTAAAAACGTGAGCACTCAAAGAAAAC 698 | |||| | | |||| | | | | || | ||||| | || ||||||| || Sbjct 242 GTAAGGACCTCTGACCAGGTACTACGTAACAGG-TCGAAACGAGGACATGCAAAGAACAC 300 Query 699 GTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGGGAATTATCATGCTT 758 |||||| ||||||||| |||||||||||||||||||||| || || |||| |||| Sbjct 301 GTGCTCCGCATCTTCACTGACTCCTGGGCAGGATGGGCATATCGGAGACATATCCCGCTT 360 Query 759 GGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATA 818 | | ||| || |||| | || || |||||||| | ||| ||||| || || || Sbjct 361 ATATTTATAGAGGTATTCCCGATAGCACCCATGTCCTGAGATCATTTGTGTCAGGTAGTA 420 Query 819 GTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGT 878 ||||||||||| ||| | ||||||| ||| || | | | |||| || ||||| | || Sbjct 421 ATTGACCTCACCATGATTACGGTTTAACCAGACATCAACCTTTGGAATAAGACGGTAGGT 480 Query 879 CCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACTTATGCT 929 |||||| || || ||| |||||||| | ||||||||| | |||||| Sbjct 481 CCATCTGCCTTTTGTACTGGTATCCCACTTCAATTGCCATCGTCGTATGCT 531 >seq1477 Length=106013 Score = 185 bits (204), Expect = 9e-43 Identities = 212/274 (77%), Gaps = 12/274 (4%) Strand=Plus/Minus Query 369 ACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCCGTA 428 |||||||||| ||||||||| |||| | | |||||||||||| | ||||||||||| Sbjct 39345 ACCCACTAAAAG--AAACCCCTTGCTCTCC-AGCCTCTGATCCCC-ACGGTACCGCCGTT 39290 Query 429 AGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATGT 488 ||||||| |||||| ||||||| || || |||| |||||||||| ||| |||||| | Sbjct 39289 AGGCATTACTTCGCAGGGGGAG-AACCAGTTGCCACTCTTCCTTCAGGTACGTAAGATCT 39231 Query 489 TATTTCT---TCCTTCTAGTTTCTGTCATTCGCTCTTT-TCTTCTCAATGGATTGCAACT 544 ||| ||| || |||||| | ||||| || ||||| | |||| || ||||| ||| | Sbjct 39230 TATATCTCTTTCTTTCTAGCTACTGTCTTTTGCTCTCTCTCTT-TCTATGGAACACAAGT 39172 Query 545 CGGTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATG-ACAGC 603 |||| || || | ||||||||| ||||| | |||| ||| ||| | || |||| ||| | Sbjct 39171 CGGTGAGGACCTCTGTAGCAAACGTGCTGCTAGCGTCCCAAGCAACCTC-GATGGACAAC 39113 Query 604 ATTGCTGCTACTATTATCTCTGGTTGGATTTTCC 637 ||||| | |||| |||||||||||||| ||| Sbjct 39112 ATTGCCTCCACTACAGTCTCTGGTTGGATTCTCC 39079 >seq941 Length=233740 Score = 185 bits (204), Expect = 9e-43 Identities = 231/308 (75%), Gaps = 9/308 (3%) Strand=Plus/Minus Query 369 ACCCACTAAACCCTAAAC-CCCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCCGT 427 |||||||||| |||| |||| |||| | | |||||||||||| | ||||||||||| Sbjct 39018 ACCCACTAAAA---AAACACCCTCGCTCTCC-AGCCTCTGATCCCC-ACGGTACCGCCGT 38964 Query 428 AAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATG 487 ||||||| |||||| |||||||||| ||| |||||||||||||| ||| |||||| Sbjct 38963 TAGGCATTACTTCGCAGGGGGAGGAACCAGCCGCCGCTCTTCCTTCAGGTACGTAAGATC 38904 Query 488 TTATTTCTTCCTTCTAGTTTCTGTCATTCGCTCT-TTTCTTCTCAATGGATTGCAACTCG 546 |||| || || || ||| | ||||| || ||||| | |||| || ||||| |||| ||| Sbjct 38903 TTATATC-TCTTTTTAGCTACTGTCTTTTGCTCTCTCTCTT-TCTATGGAACGCAAGTCG 38846 Query 547 GTAAGCACTTTTGTAGCAAAAGTGCTTGTGGCGTTCCAGGCAGCTTCTGATGACAGCATT 606 || || || | |||| || | || || | |||||||| ||||| || | |||| |||| Sbjct 38845 GTGAGGACCTCTGTAACATACGTACTGATAGCGTTCCAAGCAGCCTCGGTGGACAACATT 38786 Query 607 GCTGCTACTATTATCTCTGGTTGGATTTTCCTCTTCAGGATATTCTCCAGCTCATCCCGA 666 || | ||| |||||||||||||| ||| ||||| ||| ||| | ||| || Sbjct 38785 GCCTCCGCTACAGTCTCTGGTTGGATTCTCCGGCCGAGGATGCTCTTCAGTTTATCACGC 38726 Query 667 TGTGGGTA 674 || | ||| Sbjct 38725 TGAGTGTA 38718 >seq6172 Length=7500 Score = 116 bits (128), Expect = 4e-22 Identities = 151/201 (75%), Gaps = 11/201 (5%) Strand=Plus/Plus Query 369 ACCCACTAAACCCTAAACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCCGTA 428 |||||||||| || ||||| |||| | | ||||| ||||| | ||||||||||| Sbjct 485 ACCCACTAAAA---AACCCCCTCACTCTCC-AGCCTCTTATCCCT-ACGGTACCGCCGTT 539 Query 429 AGGCATTTCTTCGCGGGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATGT 488 ||||||| || ||| |||||||||| |||||||||||||| ||| || |||||| | Sbjct 540 AGGCATTACTACGCAGGGGGAGGAACCAGCTGCCGCTCTTCTTTC-AGTACGTAAGATCT 598 Query 489 TATTTC---TTCCTTCTAGTTTCTGTCATTCGCTCT-TTTCTTCTCAATGGATTGCAACT 544 ||| || ||| |||||| | |||| || | ||| | |||| || ||||| |||| | Sbjct 599 TATATCTCTTTCTTTCTAGCTATTGTCTTTTGTTCTCTCTCTT-TCTATGGAACGCAAGT 657 Query 545 CGGTAAGCACTTTTGTAGCAA 565 |||| || || | || ||||| Sbjct 658 CGGTGAGGACCTCTGCAGCAA 678 >seq4433 Length=94625 Score = 89.7 bits (98), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 402 CCTCTGATCCCCCATGGTACCGCCGTAAGGCATTTCTTCGCGGGGGGAGGAATTAGCTGC 461 |||||||||||| | ||||||||| | ||||||| |||||| || ||| |||| |||||| Sbjct 70096 CCTCTGATCCCCAA-GGTACCGCCATTAGGCATTACTTCGCAGGAGGATGAATCAGCTGC 70154 Query 462 CGCTCTTCCTTCTGGT 477 |||||||||||| ||| Sbjct 70155 CGCTCTTCCTTCAGGT 70170 >seq1983 Length=112547 Score = 78.8 bits (86), Expect = 9e-11 Identities = 92/121 (76%), Gaps = 5/121 (4%) Strand=Plus/Minus Query 384 AACCCCTTTCTCTTCTATCCTCTGATCCCCCATGGTACCGCCGTAAGGCATTTCTTCGCG 443 || |||| |||| | | ||||||||| || | ||||||||||| ||||||| |||| | Sbjct 30454 AAACCCTCACTCTCC-AGCCTCTGATCTCC-ACGGTACCGCCGTTAGGCATTACTTCACA 30397 Query 444 GGGGGAGGAATTAGCTGCCGCTCTTCCTTCTGGTGGCTAAGATGTTATTTCTTCCTTCTA 503 || |||||| | | |||||||||||||| ||| | ||| | |||| | || ||||| Sbjct 30396 GGAGGAGGA---ACCAGCCGCTCTTCCTTCAGGTAGGTAAATTCTTATCTTTTATTTCTA 30340 Query 504 G 504 | Sbjct 30339 G 30339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50945533329246