Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= NC_008948.1 Length=4442 Score E Sequences producing significant alignments: (Bits) Value seq776 95.1 3e-16 >seq776 Length=78043 Score = 95.1 bits (104), Expect = 3e-16 Identities = 117/155 (75%), Gaps = 5/155 (3%) Strand=Plus/Minus Query 415 GTGTGTTAAGAGCAACTCAACGTTGAGCAACGCTTAGCCACGGATCGCGACACAAGGAGC 474 ||||||| ||||||||||| |||||||||| | ||| || | | |||||| | Sbjct 42865 GTGTGTTTGAAGCAACTCAACTTTGAGCAACGTTGAGCAACT--TTGA-ACACAAATGAC 42809 Query 475 CGCCATACAAGGAGCGTTGAGTTACGAGTACGCTAATCAATGCATCCGTAATGGAG-TGT 533 ||| | ||| | ||||||||| |||||||| ||| ||||||| ||| || | ||| Sbjct 42808 CGCTAGTCAACAA-CGTTGAGTTGCGAGTACGTTAACCAATGCAAACGTTTGGGGGGTGT 42750 Query 534 TCAGACTAACGTTACTCAACGCTTCTCAACGGTGA 568 | |||||||||| ||||||||||||| ||| ||| Sbjct 42749 CCTGACTAACGTTGCTCAACGCTTCTCCACGTTGA 42715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14101125782055